RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 GNPDA2Q8TDQ7 276 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 HGDQ93099 445 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 ZNF566Q969W8 418 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 PNPLA2Q96AD5 504 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-228ENST00000511676 SGCZQ96LD1 299 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 BARD1Q99728 777 aaKnown RBP8.32□□□□□ -1.08
NR1I3-228ENST00000511676 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 TMEM43Q9BTV4 400 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 PRRG3Q9BZD7 231 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 PLEKHB1Q9UF11 243 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-228ENST00000511676 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 SLC7A7Q9UM01 511 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 MAGED1Q9Y5V3 778 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-228ENST00000511676 SEC16AO15027 2179 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 TENM4Q6N022 2769 aa8.32□□□□□ -1.08
NR1I3-228ENST00000511676 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 IGHV3-20A0A0C4DH32 117 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 A0A1B0GWA3 101 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 GTPBP1O00178 669 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 MRPS14O60783 128 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 LYPD3O95274 346 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 LYNP07948 512 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 UBTFL6P0CB48 400 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 WT1P19544 449 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 HTR2AP28223 471 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 SLC1A3P43003 542 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 RFX3P48380 749 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 P2RX1P51575 399 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 MLF1P58340 268 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 SRSF6Q13247 344 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 CBFBQ13951 182 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 SEC23BQ15437 767 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ZNF791Q3KP31 576 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 RBM48Q5RL73 367 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ZNF691Q5VV52 312 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 KLHL17Q6TDP4 642 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 LYPD8Q6UX82 237 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 TMPRSS11FQ6ZWK6 438 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ZADH2Q8N4Q0 377 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 OR9Q2Q8NGE9 314 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 OR5W2Q8NH69 310 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 PHOSPHO1Q8TCT1 267 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 TMEM239Q8WW34 195 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 TRUB1Q8WWH5 349 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 LIPHQ8WWY8 451 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ST8SIA1Q92185 356 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 HDAC2Q92769 488 aaKnown RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 C8orf44Q96CB5 159 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 NTNG2Q96CW9 530 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 CNBD2Q96M20 576 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 C5orf34Q96MH7 638 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 LMF1Q96S06 567 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 RASL10BQ96S79 203 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 PRSS27Q9BQR3 290 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 SLC25A19Q9HC21 320 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 P4HTMQ9NXG6 502 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 TUBA8Q9NY65 449 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 GPR83Q9NYM4 423 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 CNIH4Q9P003 139 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 RHCGQ9UBD6 479 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 REV1Q9UBZ9 1251 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 FBXL4Q9UKA2 621 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 ICAM5Q9UMF0 924 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 MYRFQ9Y2G1 1151 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 MED31Q9Y3C7 131 aa8.31□□□□□ -1.08
NR1I3-228ENST00000511676 RP1L1Q8IWN7 2480 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-228ENST00000511676 SDK2Q58EX2 2172 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 A0A087WUJ7 227 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 ZAR1LA6NP61 321 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 PYCARD-AS1I3L0S3 204 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 FRS3O43559 492 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 ANGPTL1O95841 491 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 GASTP01350 101 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 THY1P04216 161 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 PRG2P13727 222 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 GGT2P36268 569 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 OMPP47874 163 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 SLC9A3P48764 834 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 SSR4P51571 173 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 CCL11P51671 97 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 CRISP1P54107 249 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 SOX8P57073 446 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 GABARAPL2P60520 117 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 CDC42P60953 191 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 TUBA4AP68366 448 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 PRKCDQ05655 676 aa8.3□□□□□ -1.08
NR1I3-228ENST00000511676 PPP1R8Q12972 351 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms