RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 HOXA3O43365 443 aaPredicted RBP9.21□□□□□ -0.94
SNF8-207ENST00000509995 SUPT3HO75486 399 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 IPO7O95373 1038 aaKnown RBP9.21□□□□□ -0.94
SNF8-207ENST00000509995 NUDT14O95848 222 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 GPANK1O95872 356 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 MBD3O95983 291 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 IGLV1-44P01699 117 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 PRKCAP17252 672 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 PAX7P23759 505 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 DIO1P49895 249 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 MVKQ03426 396 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 ZNF117Q03924 483 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 GALNT1Q10472 559 aaPredicted RBP9.21□□□□□ -0.94
SNF8-207ENST00000509995 C3orf36Q3SXR2 165 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 C3orf33Q6P1S2 294 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 R3HCC1LQ7Z5L2 792 aaKnown RBP9.21□□□□□ -0.94
SNF8-207ENST00000509995 IGDCC3Q8IVU1 814 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 PIK3R3Q92569 461 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 ARL5BQ96KC2 179 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 BBS4Q96RK4 519 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 MS4A7Q9GZW8 240 aaPredicted RBP9.21□□□□□ -0.94
SNF8-207ENST00000509995 C3orf14Q9HBI5 128 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 GIMAP4Q9NUV9 329 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 C19orf53Q9UNZ5 99 aaPredicted RBP9.21□□□□□ -0.94
SNF8-207ENST00000509995 ACOT9Q9Y305 439 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 CAPN6Q9Y6Q1 641 aa9.21□□□□□ -0.94
SNF8-207ENST00000509995 PCLOQ9Y6V0 5065 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 PPIAL4EA0A075B759 164 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 PPIAL4CA0A0B4J2A2 164 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 OR6C65A6NJZ3 312 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 CXorf49A8MYA2 514 aaPredicted RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 PPIAL4DF5H284 164 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 UBXN8O00124 270 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 ESRRBO95718 433 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 PPIAL4FP0DN26 164 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 CDH2P19022 906 aaPredicted RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 TIA1P31483 386 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNF8-207ENST00000509995 GABRA3P34903 492 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 MPIP34949 423 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 EVX1P49640 407 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 SLC16A1P53985 500 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 SLC12A2P55011 1212 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 PROK1P58294 105 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 TRA2BP62995 288 aaKnown RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 CSNK2A1P68400 391 aaPredicted RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 LCN2P80188 198 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 TBX2Q13207 712 aaPredicted RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 TOMM34Q15785 309 aaPredicted RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 TBRG1Q3YBR2 411 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 TSPO2Q5TGU0 170 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 FRG2Q64ET8 278 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 FIP1L1Q6UN15 594 aaKnown RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 TMEM107Q6UX40 140 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 C9orf139Q6ZV77 190 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 MTDHQ86UE4 582 aaKnown RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 MYPOPQ86VE0 399 aaPredicted RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 GSPT2Q8IYD1 628 aaKnown RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 FRG2BQ96QU4 278 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 RBBP8Q99708 897 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 SLC30A2Q9BRI3 323 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 MRPL37Q9BZE1 423 aaKnown RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 RHOJQ9H4E5 214 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 ALG9Q9H6U8 611 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 CAB39LQ9H9S4 337 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 DDX18Q9NVP1 670 aaKnown RBP9.2□□□□□ -0.94
SNF8-207ENST00000509995 ACTL7BQ9Y614 415 aa9.2□□□□□ -0.94
SNF8-207ENST00000509995 MDFIC2A0A1B0GVS7 189 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 A0A1W2PQD3 144 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 SULT2B1O00204 365 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 UPK1AO00322 258 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 SCDO00767 359 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 PIP5K1CO60331 668 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 ERLIN1O75477 346 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 IGKV3-15P01624 115 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 HPGDP15428 266 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 TYK2P29597 1187 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 ALDH3B1P43353 468 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 SNTB2Q13425 540 aaKnown RBP9.19□□□□□ -0.94
SNF8-207ENST00000509995 MSMPQ1L6U9 139 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 OTUD3Q5T2D3 398 aaPredicted RBP9.19□□□□□ -0.94
SNF8-207ENST00000509995 CBLN3Q6UW01 205 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 TMPPEQ6ZT21 453 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 OR2L13Q8N349 312 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 PIGXQ8TBF5 258 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 STAG3L4Q8TBR4 150 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 SGCDQ92629 289 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 KTI12Q96EK9 354 aaPredicted RBP9.19□□□□□ -0.94
SNF8-207ENST00000509995 CFAP36Q96G28 342 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 CDK15Q96Q40 435 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 ATOH8Q96SQ7 321 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 ZNF385DQ9H6B1 395 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 IPPKQ9H8X2 491 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 SLC35C2Q9NQQ7 365 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 UBQLN4Q9NRR5 601 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 PURGQ9UJV8 347 aaKnown RBP9.19□□□□□ -0.94
SNF8-207ENST00000509995 SLC12A4Q9UP95 1085 aa9.19□□□□□ -0.94
SNF8-207ENST00000509995 CMAHPQ9Y471 501 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms