RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ANGPT2O15123 496 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 HNRNPCL1O60812 293 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 RAMP1O60894 148 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 SMNDC1O75940 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNF8-206ENST00000509989 IL18BPO95998 194 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 PABPC4LP0CB38 370 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 HNRNPCL4P0DMR1 293 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ELK4P28324 431 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ADH6P28332 368 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 OPRM1P35372 400 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 EIF1P41567 113 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 ANXA11P50995 505 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 CARD18P57730 90 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 RPS3AP61247 264 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 TXNL4AP83876 142 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 CDK6Q00534 326 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 FAM27E3Q08E93 113 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 BNIP2Q12982 314 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 FADDQ13158 208 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ZNF239Q16600 458 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 FBXL19-AS1Q494R0 122 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 REP15Q6BDI9 236 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 TREML1Q86YW5 311 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ZZZ3Q8IYH5 903 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ST8SIA1Q92185 356 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 NRGNQ92686 78 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 RNASE6Q93091 150 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 OR5B2Q96R09 309 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 SFXN3Q9BWM7 321 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 BCL2L10Q9HD36 194 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 EXOSC3Q9NQT5 275 aaKnown RBP12.12□□□□□ -0.47
SNF8-206ENST00000509989 GALNT8Q9NY28 637 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 OSGIN1Q9UJX0 560 aa12.12□□□□□ -0.47
SNF8-206ENST00000509989 ABCA4P78363 2273 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 TMED7-TICAM2A0A0A6YYA0 188 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 SMAD9O15198 467 aaKnown RBP12.11□□□□□ -0.47
SNF8-206ENST00000509989 OPN1SWP03999 348 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 DRD4P21917 467 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 TACR3P29371 465 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 CCKARP32238 428 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 CRYBA2P53672 197 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 EEFSECP57772 596 aaKnown RBP12.11□□□□□ -0.47
SNF8-206ENST00000509989 DMTNQ08495 405 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 SELENBP1Q13228 472 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 SCARB2Q14108 478 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 ZNF311Q5JNZ3 666 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 NANOGP8Q6NSW7 305 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
SNF8-206ENST00000509989 PEX5LQ8IYB4 626 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 ELAC2Q9BQ52 826 aaKnown RBP12.11□□□□□ -0.47
SNF8-206ENST00000509989 RBM24Q9BX46 236 aaKnown RBP12.11□□□□□ -0.47
SNF8-206ENST00000509989 PRRG4Q9BZD6 226 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 FAM107BQ9H098 131 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 NANOGQ9H9S0 305 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 TMED7Q9Y3B3 224 aa12.11□□□□□ -0.47
SNF8-206ENST00000509989 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 TPST2O60704 377 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 IMPDH2P12268 514 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 ME2P23368 584 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 HTR2AP28223 471 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 CPOXP36551 454 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 MAGEA8P43361 318 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 IRX1P78414 480 aaPredicted RBP12.1□□□□□ -0.47
SNF8-206ENST00000509989 TLE4Q04727 773 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 TUSC5Q8IXB3 177 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 CMIPQ8IY22 773 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 CADM2Q8N3J6 435 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 BBS10Q8TAM1 723 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 RNF128Q8TEB7 428 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 ZFP3Q96NJ6 502 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 ZNF300Q96RE9 604 aaPredicted RBP12.1□□□□□ -0.47
SNF8-206ENST00000509989 SPATA9Q9BWV2 254 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 ADAM19Q9H013 955 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 RAD21L1Q9H4I0 556 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 C12orf49Q9H741 205 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 KAT8Q9H7Z6 458 aaKnown RBP12.1□□□□□ -0.47
SNF8-206ENST00000509989 HHATLQ9HCP6 504 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 CALML5Q9NZT1 146 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 PACSIN3Q9UKS6 424 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 SPG11Q96JI7 2443 aa12.1□□□□□ -0.47
SNF8-206ENST00000509989 C5orf58C9J3I9 102 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 MRASO14807 208 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
SNF8-206ENST00000509989 SYNGR4O95473 234 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 FESP07332 822 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 THBS1P07996 1170 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 TFPIP10646 304 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 PTNP21246 168 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 AGTR1P30556 359 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 NTF4P34130 210 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 DIO1P49895 249 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 MYBPHQ13203 477 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms