RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 POTEKPQ9BYX7 375 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 NUF2Q9BZD4 464 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 C20orf27Q9GZN8 174 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 MARCOQ9UEW3 520 aaPredicted RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 ING1Q9UK53 422 aaPredicted RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 SLC35A3Q9Y2D2 325 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 A0A1W2PP18 115 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 ZNF724A8MTY0 619 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 TM9SF1O15321 606 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 SCN2BO60939 215 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 CCNA2P20248 432 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 BGNP21810 368 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 KHKP50053 298 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 CLNS1AP54105 237 aaKnown RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 PHC1P78364 1004 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 HPCAP84074 193 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 BSPH1Q075Z2 132 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 PPA1Q15181 289 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 SYT14P1Q58G82 188 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 TYW3Q6IPR3 259 aaKnown RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 HEPHL1Q6MZM0 1159 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 HMGN2P46Q86SG4 172 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 KIRREL3Q8IZU9 778 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 PIWIL2Q8TC59 973 aaKnown RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 SLC25A43Q8WUT9 341 aaPredicted RBP13.63□□□□□ -0.23
TPM3-219ENST00000509409 DNAJA3Q96EY1 480 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 SLC35A5Q9BS91 424 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 CTPS2Q9NRF8 586 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 POLE3Q9NRF9 147 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 PNPOQ9NVS9 261 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 EMC3Q9P0I2 261 aa13.63□□□□□ -0.23
TPM3-219ENST00000509409 DPRXA6NFQ7 191 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 KIAA0513O60268 411 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 DNAJA2O60884 412 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 SOD3P08294 240 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 GGT1P19440 569 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 IDUAP35475 653 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 PGM1P36871 562 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 OR2B6P58173 313 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 KCNJ10P78508 379 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 FAPQ12884 760 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 TNK1Q13470 666 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 CASP8Q14790 479 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 CLEC12BQ2HXU8 276 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 SPANXN4Q5MJ08 99 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 SAXO2Q658L1 398 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ATG4DQ86TL0 474 aaPredicted RBP13.62□□□□□ -0.23
TPM3-219ENST00000509409 MREGQ8N565 214 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ARFGAP2Q8N6H7 521 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ZNF75CPQ92670 426 aaPredicted RBP13.62□□□□□ -0.23
TPM3-219ENST00000509409 TESCQ96BS2 214 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ZG16BQ96DA0 208 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 NEURL3Q96EH8 262 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 SORT1Q99523 831 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ALG2Q9H553 416 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
TPM3-219ENST00000509409 CHRNA9Q9UGM1 479 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
TPM3-219ENST00000509409 USF3Q68DE3 2245 aa13.62□□□□□ -0.23
TPM3-219ENST00000509409 ABCA2Q9BZC7 2435 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 CIB4A0PJX0 185 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 CCT8L1PA6NM43 557 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 INAFM1C9JVW0 142 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 IGHV3-9P01782 118 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 GUSBP08236 651 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 IGHV1-2P23083 117 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 EDNRAP25101 427 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 FKBP2P26885 142 aaKnown RBP13.61□□□□□ -0.23
TPM3-219ENST00000509409 CDKN1AP38936 164 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 IDH2P48735 452 aaKnown RBP13.61□□□□□ -0.23
TPM3-219ENST00000509409 CHRNEQ04844 493 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 VEZF1Q14119 521 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 DPY19L1Q2PZI1 675 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 FAM174BQ3ZCQ3 159 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 CEP85LQ5SZL2 805 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 FRRS1Q6ZNA5 592 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 ZNF621Q6ZSS3 439 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 TRIML2Q8N7C3 387 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 KBTBD8Q8NFY9 601 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 OIT3Q8WWZ8 545 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 CCDC106Q9BWC9 280 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 SAP130Q9H0E3 1048 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 CISD1Q9NZ45 108 aaKnown RBP13.61□□□□□ -0.23
TPM3-219ENST00000509409 LIPT1Q9Y234 373 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 HDGFL3Q9Y3E1 203 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
TPM3-219ENST00000509409 HEATR5AQ86XA9 2040 aa13.61□□□□□ -0.23
TPM3-219ENST00000509409 CCDC154A6NI56 674 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 CLDN24A6NM45 220 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 E9PBE3 544 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 BCAS1O75363 584 aaPredicted RBP13.6□□□□□ -0.23
TPM3-219ENST00000509409 DANCRP0C864 163 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 ANXA11P50995 505 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms