RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 RNF113BQ8IZP6 322 aaKnown RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 TOR1AIP2Q8NFQ8 470 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 TP53INP1Q96A56 240 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 C3orf49Q96BT1 292 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 MVB12AQ96EY5 273 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 SLC46A1Q96NT5 459 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 ERMAPQ96PL5 475 aaPredicted RBP13.65□□□□□ -0.22
PHF3-209ENST00000509330 DUSP23Q9BVJ7 150 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 CHRNA10Q9GZZ6 450 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 MCCC2Q9HCC0 563 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 UBQLN4Q9NRR5 601 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 SNTG1Q9NSN8 517 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 COPS7AQ9UBW8 275 aa13.65□□□□□ -0.22
PHF3-209ENST00000509330 SNTNA6NMZ2 147 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 CLDN25C9JDP6 229 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 MCIDASD6RGH6 385 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 BLOC1S5-TXNDC5H3BN57 136 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 PLD2O14939 933 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 SLC1A3P43003 542 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 PPICP45877 212 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 WNT4P56705 351 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 ZNF404Q494X3 552 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 KLHL26Q53HC5 615 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 AP1ARQ63HQ0 302 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 C22orf42Q6IC83 251 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 BRIX1Q8TDN6 353 aaKnown RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 ADIPOR1Q96A54 375 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 C1GALT1C1Q96EU7 318 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 PELOQ9BRX2 385 aaKnown RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 ISG20L2Q9H9L3 353 aaKnown RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 MAGEB4O15481 346 aaPredicted RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 RCBTB2O95199 551 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 PSMA1P25786 263 aaKnown RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 HCCSP53701 268 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 FAM199XQ6PEV8 388 aaPredicted RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 TMPRSS11FQ6ZWK6 438 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 GRAMD2AQ8IUY3 354 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 TMEM99Q8N816 258 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 OR52E2Q8NGJ4 325 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 OR6Q1Q8NGQ2 317 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 IFI44Q8TCB0 444 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 ZNF578Q96N58 590 aaPredicted RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 TMED9Q9BVK6 235 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 MKKSQ9NPJ1 570 aaPredicted RBP13.64□□□□□ -0.23
PHF3-209ENST00000509330 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
PHF3-209ENST00000509330 ELOA3DA6NLF2 546 aaPredicted RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 C12orf71A8MTZ7 269 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 IDSB3KWA1 339 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 SOX30O94993 753 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 HMGN1P05114 100 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 TCEA1P23193 301 aaKnown RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.63□□□□□ -0.23
PHF3-209ENST00000509330 ELOA3BQ3SY89 546 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 FAM98AQ8NCA5 519 aaKnown RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 NLGN4YQ8NFZ3 816 aaPredicted RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 ELOA3Q8NG57 546 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 OR7G1Q8NGA0 311 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 SPRYD4Q8WW59 207 aaPredicted RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 DAZLQ92904 295 aaKnown RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 PTP4A1Q93096 173 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 RFKQ969G6 155 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 CDADC1Q9BWV3 514 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 POLE4Q9NR33 117 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 IER3IP1Q9Y5U9 82 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 CNTRLQ7Z7A1 2325 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 FAM86C2PA6NEL3 165 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 HCN1O60741 890 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 CLEC2LP0C7M8 214 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 MST1P26927 711 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 NKAIN1Q4KMZ8 207 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 NXNL2Q5VZ03 156 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 KLBQ86Z14 1044 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 LSMEM1Q8N8F7 131 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 DCLRE1CQ96SD1 692 aaKnown RBP13.63□□□□□ -0.23
PHF3-209ENST00000509330 BCL7BQ9BQE9 202 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 WWTR1Q9GZV5 400 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 SUSD2Q9UGT4 822 aa13.63□□□□□ -0.23
PHF3-209ENST00000509330 IL33O95760 270 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 HEXBP07686 556 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 CELP19835 753 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 C3orf38Q5JPI3 329 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 SLC25A30Q5SVS4 291 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 NIPAL3Q6P499 406 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 LYPD4Q6UWN0 246 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 SLC29A4Q7RTT9 530 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 WDR5BQ86VZ2 330 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZNF527Q8NB42 609 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZPLD1Q8TCW7 415 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 OMA1Q96E52 524 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms