RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 BBS10Q8TAM1 723 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 AURKBQ96GD4 344 aaPredicted RBP17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CCDC106Q9BWC9 280 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 QRSL1Q9H0R6 528 aaKnown RBP17.79■□□□□ 0.44
SFXN1-209ENST00000508290 SLC52A3Q9NQ40 469 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CHRNA9Q9UGM1 479 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 LEF1Q9UJU2 399 aaPredicted RBP17.79■□□□□ 0.44
SFXN1-209ENST00000508290 A0A0G2JND7 137 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 FAM221AA4D161 298 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 CDHR4A6H8M9 788 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 A6NNC1 897 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 C5orf58C9J3I9 102 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 PRKD3O94806 890 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 OPN1LWP04000 364 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 MAPK11Q15759 364 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 SYT14P1Q58G82 188 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 TMEM201Q5SNT2 666 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 MRPL2Q5T653 305 aaKnown RBP17.78■□□□□ 0.44
SFXN1-209ENST00000508290 ZNF550Q7Z398 422 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 CNOT9Q92600 299 aaKnown RBP17.78■□□□□ 0.44
SFXN1-209ENST00000508290 ZHX1-C8orf76Q96EF9 292 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 TMEM19Q96HH6 336 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 ZNF385DQ9H6B1 395 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 COQ10BQ9H8M1 238 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 KLHL9Q9P2J3 617 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 NDUFAF1Q9Y375 327 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 HDGFL3Q9Y3E1 203 aa17.78■□□□□ 0.44
SFXN1-209ENST00000508290 MYO9AB2RTY4 2548 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 DCHS2Q6V1P9 2916 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 ANGPT2O15123 496 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 POU2F1P14859 743 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 SHC1P29353 583 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 RYKP34925 604 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 SLC1A3P43003 542 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 BEND4Q6ZU67 534 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 FCRLAQ7L513 359 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 KRT73Q86Y46 540 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 OR5B2Q96R09 309 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 SPATA5L1Q9BVQ7 753 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 CCDC134Q9H6E4 229 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 RASSF1Q9NS23 344 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 SLC25A37Q9NYZ2 338 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 KLHL13Q9P2N7 655 aa17.77■□□□□ 0.44
SFXN1-209ENST00000508290 TRBV5-3A0A0A0MS03 114 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 SH3D21A4FU49 640 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 CLDN24A6NM45 220 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 C16orf97H3BN30 126 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 CASKO14936 926 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF208O43345 1280 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ETS2P15036 469 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 PPP3CBP16298 524 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ENPP1P22413 925 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 AGTR1P30556 359 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 KCNJ5P48544 419 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 IDH2P48735 452 aaKnown RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 POLR2HP52434 150 aaKnown RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 COPZ1P61923 177 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 EPS8Q12929 822 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 GCNT6Q5T4J0 391 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF474Q6S9Z5 364 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 TMPPEQ6ZT21 453 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 CDH24Q86UP0 819 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 DPP10Q8N608 796 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ATP6V1C2Q8NEY4 427 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 SPATA9Q9BWV2 254 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 POLDIP3Q9BY77 421 aaKnown RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 CLEC4MQ9H2X3 399 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 TMEM38AQ9H6F2 299 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF226Q9NYT6 803 aa17.76■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF443Q9Y2A4 671 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-209ENST00000508290 PMS2P2O95744 297 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 GPX2P18283 190 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 UGT2B10P36537 528 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 DIO1P49895 249 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 PLAURQ03405 335 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 PAGE3Q5JUK9 113 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 MSRB3Q8IXL7 192 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF610Q8N9Z0 462 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 BHLHE22Q8NFJ8 381 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF524Q96C55 264 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 DDIT4LQ96D03 193 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 TMEM120AQ9BXJ8 343 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 SRXN1Q9BYN0 137 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 OR10A4Q9H209 315 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 EVA1AQ9H8M9 152 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 BCO1Q9HAY6 547 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 CTPS2Q9NRF8 586 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 VAPAQ9P0L0 249 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-209ENST00000508290 TRAPPC4Q9Y296 219 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 TESMINQ9Y4I5 508 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 PCNX3Q9H6A9 2034 aa17.75■□□□□ 0.43
SFXN1-209ENST00000508290 SULT2B1O00204 365 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 CYTIPO60759 359 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 BCAS1O75363 584 aaPredicted RBP17.74■□□□□ 0.43
SFXN1-209ENST00000508290 PGM3O95394 542 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 YES1P07947 543 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 ARAFP10398 606 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 TFPIP10646 304 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms