RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 NUFIP2Q7Z417 695 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 GALNT5Q7Z7M9 940 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 MTDHQ86UE4 582 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 ANKRD46Q86W74 232 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 ARFGAP2Q8N6H7 521 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 S100PBPQ96BU1 408 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 MUCL1Q96DR8 90 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 COX4I2Q96KJ9 171 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 TRNT1Q96Q11 434 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 PANX1Q96RD7 426 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 KLHDC3Q9BQ90 382 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF701Q9NV72 531 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 AIG1Q9NVV5 245 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 RNF115Q9Y4L5 304 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 NAV3Q8IVL0 2385 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 ROS1P08922 2347 aa12.82□□□□□ -0.36
HMGCS1-203ENST00000507004 HEATR5AQ86XA9 2040 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 IGKV3D-15A0A087WSY6 115 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 A0A1W2PNR3 127 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 FAAHO00519 579 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 PMS2P2O95744 297 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 ADAP00813 363 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 IL6P05231 212 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 PGRP06401 933 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 HEXAP06865 529 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 PTH2RP49190 550 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 DIO1P49895 249 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 CLEC9AQ6UXN8 241 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 DNAJC14Q6Y2X3 702 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 FRRS1Q6ZNA5 592 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 LRRC74BQ6ZQY2 392 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 C22orf34Q6ZV56 151 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 BHLHA15Q7RTS1 189 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF440Q8IYI8 595 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF100Q8IYN0 542 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 PIGXQ8TBF5 258 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 NUDT8Q8WV74 236 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 GTPBP3Q969Y2 492 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 TRMT61AQ96FX7 289 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 RADILQ96JH8 1075 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 PAIP2Q9BPZ3 127 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 MTHFD2LQ9H903 347 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 THUMPD1Q9NXG2 353 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 CALML5Q9NZT1 146 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 KCNE5Q9UJ90 142 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 TRAPPC4Q9Y296 219 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 V9GYY5 206 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 FLNAP21333 2647 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
HMGCS1-203ENST00000507004 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 CCDC154A6NI56 674 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 SMAD9O15198 467 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF208O43345 1280 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 EIF1BO60739 113 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 ERLIN1O75477 346 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 H6PDO95479 791 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 TFPIP10646 304 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 IDO1P14902 403 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 HOXB4P17483 251 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 PHC1P78364 1004 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 LTBQ06643 244 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 TAB1Q15750 504 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 GSTA3Q16772 222 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 TIMM23BQ5SRD1 257 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 NCMAPQ5T1S8 102 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 MSANTD1Q6ZTZ1 278 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 AKAP1Q92667 903 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 RAB8BQ92930 207 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 FBXW5Q969U6 566 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 PERPQ96FX8 193 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 Q96MF0 132 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 OR52E6Q96RD3 313 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 CCDC106Q9BWC9 280 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 GSX1Q9H4S2 264 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 NKIRAS1Q9NYS0 192 aa12.8□□□□□ -0.36
HMGCS1-203ENST00000507004 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 AGAP5A6NIR3 686 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 HMGN4O00479 90 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 SDHDO14521 159 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 DBIP07108 87 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 COX5AP20674 150 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 RNF144AP50876 292 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 SLC16A1P53985 500 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 CAPRIN1Q14444 709 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 MAPK14Q16539 360 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 ABLIM2Q6H8Q1 611 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF621Q6ZSS3 439 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 PEX5LQ8IYB4 626 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 CLEC4FQ8N1N0 589 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 PIWIL2Q8TC59 973 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 NAA11Q9BSU3 229 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 GRIP2Q9C0E4 1043 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms