RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 FNDC7Q5VTL7 733 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 GDF7Q7Z4P5 450 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 TOR1AIP2Q8NFQ8 470 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 OR5L2Q8NGL0 311 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 SLC41A3Q96GZ6 507 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 ZNF559Q9BR84 538 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 GRIP2Q9C0E4 1043 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 RNF32Q9H0A6 362 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 RIBC2Q9H4K1 309 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 MGAT4BQ9UQ53 548 aa12.65□□□□□ -0.38
SERF1B-204ENST00000506542 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 TRAPPC13A5PLN9 417 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 E9PQ18 207 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 OR10H3O60404 316 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ICOSLGO75144 302 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 UGT2B11O75310 529 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 GASTP01350 101 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 THY1P04216 161 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 NGFRP08138 427 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 HPGDP15428 266 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ACAA2P42765 397 aaKnown RBP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 GPR85P60893 370 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 SRSF1Q07955 248 aaKnown RBP eCLIP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 NPRL3Q12980 569 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 IL18R1Q13478 541 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 OR1Q1Q15612 314 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 EIF2S3LQ2VIR3 472 aaKnown RBP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 PGBD2Q6P3X8 592 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 IL20RBQ6UXL0 311 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF550Q7Z398 422 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 GALNTL5Q7Z4T8 443 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 OR4K5Q8NGD3 323 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 MUS81Q96NY9 551 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 RASL10BQ96S79 203 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 DGCR6LQ9BY27 220 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 PNPLA3Q9NST1 481 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 MYOTQ9UBF9 498 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 DOPEY2Q9Y3R5 2298 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 PCNX3Q9H6A9 2034 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 A0A087WUU8 490 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 OR6C70A6NIJ9 312 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ADAM11O75078 769 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 SLC25A12O75746 678 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 POU2F1P14859 743 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 MST1P26927 711 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 UGT2B15P54855 530 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 KEAP1Q14145 624 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 RNFT1Q5M7Z0 435 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 APOOLQ6UXV4 268 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF440Q8IYI8 595 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 TMEM156Q8N614 296 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ACOT11Q8WXI4 607 aaPredicted RBP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
SERF1B-204ENST00000506542 PITX2Q99697 317 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 ENOPH1Q9UHY7 261 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 NPFFR2Q9Y5X5 522 aa12.64□□□□□ -0.39
SERF1B-204ENST00000506542 NCKAP5O14513 1909 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 FLNBO75369 2602 aaKnown RBP12.63□□□□□ -0.39
SERF1B-204ENST00000506542 MPDZO75970 2070 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 A0A1W2PQD3 144 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 BCKDKO14874 412 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 NADKO95544 446 aaPredicted RBP12.63□□□□□ -0.39
SERF1B-204ENST00000506542 SP1P08047 785 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 EPHA2P29317 976 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 CYB561P49447 251 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 CLK3P49761 638 aaKnown RBP12.63□□□□□ -0.39
SERF1B-204ENST00000506542 HLCSP50747 726 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 SSR4P51571 173 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 CD226Q15762 336 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 NDUFAF6Q330K2 333 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 DESI1Q6ICB0 168 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 C1orf94Q6P1W5 598 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 KLHL17Q6TDP4 642 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 NKAIN4Q8IVV8 208 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 C8orf59Q8N0T1 100 aaPredicted RBP12.63□□□□□ -0.39
SERF1B-204ENST00000506542 CYP4Z2PQ8N1L4 340 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 LSMEM1Q8N8F7 131 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 SCMH1Q96GD3 660 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 PRSS27Q9BQR3 290 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 TRIM2Q9C040 744 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 EXOSC3Q9NQT5 275 aaKnown RBP12.63□□□□□ -0.39
SERF1B-204ENST00000506542 DEPPQ9NTK1 212 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 ABI3Q9P2A4 366 aa12.63□□□□□ -0.39
SERF1B-204ENST00000506542 NDRG4Q9ULP0 352 aaKnown RBP12.63□□□□□ -0.39
SERF1B-204ENST00000506542 PTPN13Q12923 2485 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms