RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 BEND3Q5T5X7 828 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 RUFY3Q7L099 469 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 TIPARPQ7Z3E1 657 aaKnown RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 CTAGE6Q86UF2 777 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCDC50Q8IVM0 306 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 CLEC4FQ8N1N0 589 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ADAMTS16Q8TE57 1224 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 SCFD1Q8WVM8 642 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ITLN1Q8WWA0 313 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 TMEM80Q96HE8 168 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PSMB7Q99436 277 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PLIN2Q99541 437 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCDC77Q9BR77 488 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 TM2D1Q9BX74 207 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 OPN3Q9H1Y3 402 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PNNQ9H307 717 aaKnown RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 METTL7AQ9H8H3 244 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ETNK2Q9NVF9 386 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 WRAP73Q9P2S5 460 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 SEC14L3Q9UDX4 400 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC2A6Q9UGQ3 507 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 ADAM28Q9UKQ2 775 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 PIGLQ9Y2B2 252 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 POLDIP2Q9Y2S7 368 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 MOB4Q9Y3A3 225 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 FRMPD3Q5JV73 1810 aa4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 TRPM3Q9HCF6 1732 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 YTHDC2Q9H6S0 1430 aaKnown RBP4.2□□□□□ -1.74
HMGB1P3-201ENST00000502802 NSD2O96028 1365 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 ARHGEF28Q8N1W1 1705 aaKnown RBP4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 NWD2Q9ULI1 1742 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 CRYBG1Q9Y4K1 1723 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SHISA9B4DS77 424 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 NBR2O15453 112 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 CD55P08174 381 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 CT45A10P0DMU9 189 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 NCK1P16333 377 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 IMPDH1P20839 514 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SERPINA2P20848 420 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC10A1Q14973 349 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 LTB4RQ15722 352 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC25A52Q3SY17 297 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 GLIPR1L2Q4G1C9 344 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 TP53I3Q53FA7 332 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SFT2D3Q587I9 215 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCBE1Q6UXH8 406 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 TRPM8Q7Z2W7 1104 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SERPINA9Q86WD7 417 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 UBE2J2Q8N2K1 259 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 CSNK1A1LQ8N752 337 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 NECAB1Q8N987 351 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR51G2Q8NGK0 314 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR6T1Q8NGN1 323 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZBED6CLQ96FA7 236 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 CITED1Q99966 193 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 PARD6BQ9BYG5 372 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 PPDPFQ9H3Y8 114 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 GLIPR2Q9H4G4 154 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 MCCC2Q9HCC0 563 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SAMD4AQ9UPU9 718 aaKnown RBP4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 SCML2Q9UQR0 700 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 L3MBTL1Q9Y468 752 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 TIMM10BQ9Y5J6 103 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 ATRNO75882 1429 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 ALS2Q96Q42 1657 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 GLI3P10071 1580 aa4.19□□□□□ -1.74
HMGB1P3-201ENST00000502802 BCL9LQ86UU0 1499 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 RAB3GAP2Q9H2M9 1393 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 IGHV2-70DA0A0C4DH43 119 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ARHGEF35A5YM69 484 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF840PA6NDX5 716 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCT8L1PA6NM43 557 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR52A4PA6NMU1 304 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 E9PAM4 449 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 E9PQ18 207 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 FCN1O00602 326 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC17A2O00624 439 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 RS1O15537 224 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 TIMM8AO60220 97 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 GALR3O60755 368 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 UGT2B17O75795 530 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 CIB2O75838 187 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 TSPAN12O95859 305 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC2A3P11169 496 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 MX1P20591 662 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 EFNB2P52799 333 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 HMGCS2P54868 508 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 SEC61GP60059 68 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCNA1P78396 465 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 MS4A2Q01362 244 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 CUL2Q13617 745 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 DPYSL2Q16555 572 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF343Q6P1L6 599 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 VITQ6UXI7 678 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 TPRA1Q86W33 373 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 KIR3DL3Q8N743 410 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 PPP1R16AQ96I34 528 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 NIPSNAP3BQ9BS92 247 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms