RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 IFI6P09912 130 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 SLC35E2P0CK97 266 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ZNF19P17023 458 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 F8A1P23610 371 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ACVR1BP36896 505 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 RACK1P63244 317 aaKnown RBP9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ADAM15Q13444 863 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ALG10BQ5I7T1 473 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 PRR23CQ6ZRP0 262 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 VASH1Q7L8A9 365 aaPredicted RBP9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ARHGEF39Q8N4T4 335 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 DUSP18Q8NEJ0 188 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 OR5M3Q8NGP4 307 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 OR5J2Q8NH18 312 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ACOT12Q8WYK0 555 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 PMM1Q92871 262 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 LMF2Q9BU23 707 aaKnown RBP9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ERVMER34-1Q9H9K5 563 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 FBXL21Q9UKT6 434 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 ALG5Q9Y673 324 aa9.09□□□□□ -0.96
CLIP1-204ENST00000501271 PRUNE2Q8WUY3 3088 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 TMEM131Q92545 1883 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 A0A0G2JK05 382 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 A0A1B0GVC2 190 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 OR5K3A6NET4 321 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 A6NIN4 97 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 TTC36A6NLP5 189 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 LANCL1O43813 399 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 CDC123O75794 336 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 SC5DO75845 299 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 SEMA4FO95754 770 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 IGHV4-34P06331 123 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 TFPIP10646 304 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 PEPDP12955 493 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 HK1P19367 917 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 ALAS2P22557 587 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 HCCSP53701 268 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 MRPS21P82921 87 aaKnown RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 CRYZQ08257 329 aaKnown RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 EIF2B5Q13144 721 aaKnown RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 CDK10Q15131 360 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 SF3A2Q15428 464 aaKnown RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 NDUFAF6Q330K2 333 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 CCDC92Q53HC0 331 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 SFXN4Q6P4A7 337 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 GRAMD2AQ8IUY3 354 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 GPALPP1Q8IXQ4 340 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 ARL14Q8N4G2 192 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 OR13C5Q8NGS8 318 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 ABHD4Q8TB40 342 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 HMGB4Q8WW32 186 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 UBL7Q96S82 380 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 WACQ9BTA9 647 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 GSDMCQ9BYG8 508 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 ENAMQ9NRM1 1142 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 PAQR5Q9NXK6 330 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-204ENST00000501271 HCN3Q9P1Z3 774 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 RASD1Q9Y272 281 aa9.08□□□□□ -0.96
CLIP1-204ENST00000501271 A0A0A6YYC8 382 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 FAM240BA0A1B0GVZ2 78 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 I3L1I5 382 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 MAGEB4O15481 346 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 DRD1P21728 446 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 HLA-DMAP28067 261 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 PYCR1P32322 319 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 AGFG1P52594 562 aaKnown RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 CLDN20P56880 219 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 C1orf61Q13536 156 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 NNATQ16517 81 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 NDUFA5Q16718 116 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 ZNF57Q68EA5 555 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 KIRREL2Q6UWL6 708 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 NPSR1Q6W5P4 371 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 CEACAM19Q7Z692 300 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 PXKQ7Z7A4 578 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 TAF8Q7Z7C8 310 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 NOXA1Q86UR1 476 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 OOSP2Q86WS3 158 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 LRRC28Q86X40 367 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 CADM2Q8N3J6 435 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SLC44A3Q8N4M1 653 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SAMD12Q8N8I0 201 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 AVL9Q8NBF6 648 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SDR9C7Q8NEX9 313 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 VSTM2LQ96N03 204 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 CYSLTR2Q9NS75 346 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 HAO2Q9NYQ3 351 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 HS3ST3A1Q9Y663 406 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 GON4LQ3T8J9 2241 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 KIR2DS5A0A0G2JLQ3 304 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 A0A0G2JNG1 304 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 C10orf142B7Z368 130 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 LRRN3E7EW58 273 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 KIR2DS3K7RE56 304 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 FOXS1O43638 330 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 PAHP00439 452 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 TFP02787 698 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms