RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 B3GALT1Q9Y5Z6 326 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TMEM14AQ9Y6G1 99 aa7.69□□□□□ -1.18
USP54-215ENST00000497106 TMED7-TICAM2A0A0A6YYA0 188 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CDC14CA4D256 554 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ZAR1LA6NP61 321 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ZNF670-ZNF695F2Z2N8 137 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 BLOC1S5-TXNDC5H3BN57 136 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ZNF701M0R085 212 aaPredicted RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 CT45A8P0DMV1 189 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CT45A9P0DMV2 189 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 PSMA1P25786 263 aaKnown RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 CYB561P49447 251 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 TRAM1Q15629 374 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CT45A2Q5DJT8 189 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 PAMR1Q6UXH9 720 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 DPY19L2P2Q6ZN68 376 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 MARCH3Q86UD3 253 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 LAPTM4BQ86VI4 370 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 RBM45Q8IUH3 476 aaKnown RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 OR2T4Q8NH00 348 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 FNDC8Q8TC99 324 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ZBTB8AQ96BR9 441 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 RNFT2Q96EX2 444 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 SLITRK2Q9H156 845 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CDCP1Q9H5V8 836 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 TMED7Q9Y3B3 224 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 DAPL1A0PJW8 107 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 DPPA5A6NC42 116 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 LINC01387J3KSC0 135 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 SLC22A1O15245 554 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 SUSD5O60279 629 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CLIC3O95833 236 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 SERPINA3P01011 423 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 PIPP12273 146 aaPredicted RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 CD59P13987 128 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 AHCYP23526 432 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CFHR1Q03591 330 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 AIMP2Q13155 320 aaKnown RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 AMER2Q8N7J2 671 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ATP6V1C2Q8NEY4 427 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 OR51A7Q8NH64 312 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 LRR1Q96L50 414 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 RBP7Q96R05 134 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 PRRG4Q9BZD6 226 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP54-215ENST00000497106 FKRPQ9H9S5 495 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 RLIMQ9NVW2 624 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 VNN3Q9NY84 501 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 MYOTQ9UBF9 498 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ZNF229Q9UJW7 825 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 A0A1W2PS29 197 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ZNF823P16415 610 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 CRHBPP24387 322 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 HOXC5Q00444 222 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 QPRTQ15274 297 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 SF3B4Q15427 424 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP54-215ENST00000497106 EMC4Q5J8M3 183 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 RAET1LQ5VY80 246 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 BORAQ6PGQ7 559 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 NPSR1Q6W5P4 371 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 DUSP19Q8WTR2 217 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 TMEM255BQ8WV15 326 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 MNTQ99583 582 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 NIPSNAP1Q9BPW8 284 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 PIGQQ9BRB3 760 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 DNAJC27Q9NZQ0 273 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 GOLGA4Q13439 2230 aaKnown RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 CENPBD1B2RD01 187 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 SLC30A4O14863 429 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 DNAJB6O75190 326 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 IGKV3-11P04433 115 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ARPC4P59998 168 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ACTA2P62736 377 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ACTG2P63267 376 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 TIGD6Q17RP2 521 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 IL20RBQ6UXL0 311 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 TMPRSS11FQ6ZWK6 438 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ANKK1Q8NFD2 765 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 PROKR2Q8NFJ6 384 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 RHOXF1Q8NHV9 184 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 OR51V1Q9H2C8 321 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 KCNN2Q9H2S1 579 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 APMAPQ9HDC9 416 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 ASB6Q9NWX5 421 aa7.68□□□□□ -1.18
USP54-215ENST00000497106 FBXO9Q9UK97 447 aaPredicted RBP7.68□□□□□ -1.18
USP54-215ENST00000497106 IMPA2O14732 288 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 IGF2P01344 180 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 TMBIM6P55061 237 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 OR2B6P58173 313 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 FUT5Q11128 374 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 ST3GAL4Q11206 333 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 NADK2Q4G0N4 442 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 FAM69AQ5T7M9 428 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 GPR107Q5VW38 600 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 ZNF620Q6ZNG0 422 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 OLIG3Q7RTU3 272 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 TMEM179BQ7Z7N9 219 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 TMEM178AQ8NBL3 297 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 SNX33Q8WV41 574 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 NEK6Q9HC98 313 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms