RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 A0A1B0GTH9 108 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 TCRBV3S1A0A5B6 114 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 TRAPPC13A5PLN9 417 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 B8ZZF3 427 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 WISP2O76076 250 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 OR5F1O95221 314 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 WISP1O95388 367 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 ACTL6AO96019 429 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 PEPDP12955 493 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 ITGA2P17301 1181 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 IFNA8P32881 189 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 APOBEC1P41238 236 aaKnown RBP16.57■□□□□ 0.24
TSSC4-210ENST00000496468 VLDLRP98155 873 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 CHRNB3Q05901 458 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 CRYZQ08257 329 aaKnown RBP16.57■□□□□ 0.24
TSSC4-210ENST00000496468 DCST1Q5T197 706 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
TSSC4-210ENST00000496468 GFRALQ6UXV0 394 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 ADGRG5Q8IZF4 528 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 RNF217Q8TC41 542 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 ABTB1Q969K4 478 aaPredicted RBP16.57■□□□□ 0.24
TSSC4-210ENST00000496468 SARAFQ96BY9 339 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 SERINC1Q9NRX5 453 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 CHRNA9Q9UGM1 479 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 OSGIN1Q9UJX0 560 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 RALYQ9UKM9 306 aaKnown RBP16.57■□□□□ 0.24
TSSC4-210ENST00000496468 AURKCQ9UQB9 309 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 AP4B1Q9Y6B7 739 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 COL6A6A6NMZ7 2263 aa16.57■□□□□ 0.24
TSSC4-210ENST00000496468 TMED7-TICAM2A0A0A6YYA0 188 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 OR14I1A6ND48 311 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ELOA3DA6NLF2 546 aaPredicted RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 CHP2O43745 196 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 RRP9O43818 475 aaKnown RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 SEMA7AO75326 666 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 FREM3P0C091 2139 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 UMPSP11172 480 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 BMP7P18075 431 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 IL11P20809 199 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 CXCR1P25024 350 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 YAP1P46937 504 aaKnown RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 RBPJQ06330 500 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 CCNIQ14094 377 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ELOA3BQ3SY89 546 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ULK3Q6PHR2 472 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ATG4DQ86TL0 474 aaPredicted RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 TSPYL5Q86VY4 417 aaPredicted RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ZDHHC21Q8IVQ6 265 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ST6GALNAC3Q8NDV1 305 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ELOA3Q8NG57 546 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 SLC25A43Q8WUT9 341 aaPredicted RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 SLC41A3Q96GZ6 507 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 C7orf34Q96L11 122 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ADAM19Q9H013 955 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 C12orf10Q9HB07 376 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 IL1RAPQ9NPH3 570 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 NDUFAF4Q9P032 175 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 STOML1Q9UBI4 398 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 TNFRSF10DQ9UBN6 386 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 SLC7A7Q9UM01 511 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 TMED7Q9Y3B3 224 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 ZNF337Q9Y3M9 751 aa16.56■□□□□ 0.24
TSSC4-210ENST00000496468 FAM32AQ9Y421 112 aaKnown RBP16.56■□□□□ 0.24
TSSC4-210ENST00000496468 GJE1A6NN92 205 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 J3KTA2 159 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 SEC14L5O43304 696 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 MT-ND1P03886 318 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 RAP2AP10114 183 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 PNMTP11086 282 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 ABOP16442 354 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 HOXB6P17509 224 aaKnown RBP16.55■□□□□ 0.24
TSSC4-210ENST00000496468 CCNA2P20248 432 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 SFTPDP35247 375 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 MAGEA2P43356 314 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 LHX2P50458 406 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 CDH12P55289 794 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 RAC1P63000 192 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 TLE1Q04724 770 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 PIN1Q13526 163 aaPredicted RBP16.55■□□□□ 0.24
TSSC4-210ENST00000496468 KPNB1Q14974 876 aaKnown RBP16.55■□□□□ 0.24
TSSC4-210ENST00000496468 VASNQ6EMK4 673 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 ATP6V1C2Q8NEY4 427 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 CANT1Q8WVQ1 401 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 ZNF300Q96RE9 604 aaPredicted RBP16.55■□□□□ 0.24
TSSC4-210ENST00000496468 A4GNTQ9UNA3 340 aa16.55■□□□□ 0.24
TSSC4-210ENST00000496468 SHANK1Q9Y566 2161 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 TMEM72A0PK05 275 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 NPIPA2E9PIF3 369 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 NPIPA3F8WFD2 350 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 BCKDKO14874 412 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 RHCEP18577 417 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 SLC7A1P30825 629 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 PTGS2P35354 604 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 ACTR3P61158 418 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 C3AR1Q16581 482 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 SYT14P1Q58G82 188 aa16.54■□□□□ 0.24
TSSC4-210ENST00000496468 ZNF771Q7L3S4 317 aaPredicted RBP16.54■□□□□ 0.24
TSSC4-210ENST00000496468 FGD2Q7Z6J4 655 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms