RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TMEM204Q9BSN7 226 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 CCDC106Q9BWC9 280 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 FANCFQ9NPI8 374 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 THAP1Q9NVV9 213 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 SLC35A3Q9Y2D2 325 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 CCDC154A6NI56 674 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 HDAC3O15379 428 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SMPD2O60906 423 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 FESP07332 822 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 CHRM4P08173 479 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 HOXB4P17483 251 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-209ENST00000496445 DIO1P49895 249 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 MAGOHP61326 146 aaKnown RBP12.67□□□□□ -0.38
VTI1A-209ENST00000496445 HPCAP84074 193 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SYT14P1Q58G82 188 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 COX20Q5RI15 118 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SFRP5Q5T4F7 317 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SHEQ5VZ18 495 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 ABLIM2Q6H8Q1 611 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SLC43A2Q8N370 569 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 TMEM234Q8WY98 164 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF75CPQ92670 426 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-209ENST00000496445 PIGTQ969N2 578 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 TLCD1Q96CP7 247 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 MAELQ96JY0 434 aaKnown RBP12.67□□□□□ -0.38
VTI1A-209ENST00000496445 PANX1Q96RD7 426 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SLC38A1Q9H2H9 487 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 EXOSC3Q9NQT5 275 aaKnown RBP12.67□□□□□ -0.38
VTI1A-209ENST00000496445 CTPS2Q9NRF8 586 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 SLC6A13Q9NSD5 602 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 KLHL9Q9P2J3 617 aa12.67□□□□□ -0.38
VTI1A-209ENST00000496445 TRPC5OSA6NMA1 111 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 ADAP00813 363 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 GSNP06396 782 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
VTI1A-209ENST00000496445 OR3A2P47893 321 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 SLC18A1P54219 525 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 NR1H2P55055 460 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 KCNJ10P78508 379 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 RASGEF1BQ0VAM2 473 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 TAB1Q15750 504 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 MAPK11Q15759 364 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 SLC9B1Q4ZJI4 515 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 GPAT3Q53EU6 434 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 TMPPEQ6ZT21 453 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 STEAP2Q8NFT2 490 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 PNPT1Q8TCS8 783 aaKnown RBP12.66□□□□□ -0.38
VTI1A-209ENST00000496445 CNOT9Q92600 299 aaKnown RBP12.66□□□□□ -0.38
VTI1A-209ENST00000496445 PERPQ96FX8 193 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 TRNT1Q96Q11 434 aaKnown RBP12.66□□□□□ -0.38
VTI1A-209ENST00000496445 OR52E6Q96RD3 313 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
VTI1A-209ENST00000496445 PRSS50Q9UI38 385 aa12.66□□□□□ -0.38
VTI1A-209ENST00000496445 AP3D1O14617 1153 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 RYKP34925 604 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 APOBEC1P41238 236 aaKnown RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 MVDP53602 400 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 PDCD4Q53EL6 469 aaKnown RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ATG16L1Q676U5 607 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 DNAJC14Q6Y2X3 702 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 Q6ZT83 130 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ATG4DQ86TL0 474 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 P3H2Q8IVL5 708 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 GLB1L3Q8NCI6 653 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF563Q8TA94 476 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 SLC25A43Q8WUT9 341 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ARL8AQ96BM9 186 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF775Q96BV0 537 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 DNAJA3Q96EY1 480 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ARL5BQ96KC2 179 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 C18orf12Q96KH6 178 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 SERINC1Q9NRX5 453 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-209ENST00000496445 CHRNA9Q9UGM1 479 aa12.65□□□□□ -0.38
VTI1A-209ENST00000496445 CUBNO60494 3623 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 TLN2Q9Y4G6 2542 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 AGAP5A6NIR3 686 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF716A6NP11 495 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF724A8MTY0 619 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 SULT2B1O00204 365 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 HS3ST1O14792 307 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 INHBBP09529 407 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 IDO1P14902 403 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 COX5AP20674 150 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 IL32P24001 234 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 PTH2RP49190 550 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 CSNK2A1P68400 391 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 TXNL4AP83876 142 aaKnown RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ITGADQ13349 1161 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 P2RY6Q15077 328 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms