RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 UMODP07911 640 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 EVI2BP34910 448 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 ETV5P41161 510 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC26A5P58743 744 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 NFATC3Q12968 1075 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 CCDC157Q569K6 752 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 OAFQ86UD1 273 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 LNX2Q8N448 690 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 LRRC17Q8N6Y2 441 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 BBS1Q8NFJ9 593 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 OR52I1Q8NGK6 324 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 LGALS12Q96DT0 336 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 CMKLR1Q99788 373 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 MRPS18AQ9NVS2 196 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 NXT1Q9UKK6 140 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 NPFFR2Q9Y5X5 522 aa12.5□□□□□ -0.41
SPTBN1-205ENST00000496323 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 WWP2O00308 870 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 HCRTR2O43614 444 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 NDUFB5O43674 189 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 GMFGO60234 142 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 HCN1O60741 890 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 WISP1O95388 367 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 CYC1P08574 325 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 BMP7P18075 431 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 SPCS2Q15005 226 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 TOMM34Q15785 309 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 GALNT6Q8NCL4 622 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 OR52L1Q8NGH7 329 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 C9orf43Q8TAL5 461 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 CRELD1Q96HD1 420 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 TBL1XR1Q9BZK7 514 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 HINT3Q9NQE9 182 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 LOC102723996A0A087X1L8 192 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 PPM1BO75688 479 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 APOL3O95236 402 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 CD36P16671 472 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF182P17025 639 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 NRG3P56975 720 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 FBXW4P57775 412 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 PSPHP78330 225 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 FOXK2Q01167 660 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 DBPQ10586 325 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF362Q5T0B9 420 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC35F1Q5T1Q4 408 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC46A3Q7Z3Q1 461 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 P2RY8Q86VZ1 359 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 CYP4Z2PQ8N1L4 340 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 OR8K3Q8NH51 312 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 SGTBQ96EQ0 304 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 IFT27Q9BW83 186 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 ADAM19Q9H013 955 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 C19orf25Q9UFG5 118 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 DIMT1Q9UNQ2 313 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 LOXL2Q9Y4K0 774 aa12.49□□□□□ -0.41
SPTBN1-205ENST00000496323 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 SCO2O43819 266 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 PNMTP11086 282 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 GRK5P34947 590 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC1A3P43003 542 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 INSM1Q01101 510 aaPredicted RBP12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 EGR4Q05215 589 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 PCOLCEQ15113 449 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF367Q7RTV3 350 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 CPOQ8IVL8 374 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 OR5M3Q8NGP4 307 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 PLEKHA8Q96JA3 519 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC19A3Q9BZV2 496 aa12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 GPN3Q9UHW5 284 aaPredicted RBP12.48□□□□□ -0.41
SPTBN1-205ENST00000496323 ELOA3DA6NLF2 546 aaPredicted RBP12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 TACR3P29371 465 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 SLC6A8P48029 635 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 MTNR1AP48039 350 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 CDH11P55287 796 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 ELOA3BQ3SY89 546 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 ARMCX4Q5H9R4 360 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 RTL4Q6ZR62 310 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 ELOA3Q8NG57 546 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 OR5W2Q8NH69 310 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 ZNF563Q8TA94 476 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 ZFAND2BQ8WV99 257 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 RPL3LQ92901 407 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 HGDQ93099 445 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 CCNL2Q96S94 520 aaPredicted RBP12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 TAPBPLQ9BX59 468 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 HCAR1Q9BXC0 346 aa12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 PTRH2Q9Y3E5 179 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-205ENST00000496323 COL27A1Q8IZC6 1860 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms