RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 SHC1P29353 583 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 SLC7A1P30825 629 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 APOBEC1P41238 236 aaKnown RBP14.59□□□□□ -0.07
YIF1A-209ENST00000494836 HTR3AP46098 478 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 NUDT2P50583 147 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 GZMMP51124 257 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 COPZ1P61923 177 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 PON3Q15166 354 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 VMACQ2NL98 169 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 TMEM176BQ3YBM2 270 aaPredicted RBP14.59□□□□□ -0.07
YIF1A-209ENST00000494836 INTS11Q5TA45 600 aaKnown RBP14.59□□□□□ -0.07
YIF1A-209ENST00000494836 HBMQ6B0K9 141 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 PPP4R4Q6NUP7 873 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 DHRS4L2Q6PKH6 230 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 CALHM3Q86XJ0 350 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 BHLHE22Q8NFJ8 381 aaPredicted RBP14.59□□□□□ -0.07
YIF1A-209ENST00000494836 FNDC9Q8TBE3 224 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 SLC25A43Q8WUT9 341 aaPredicted RBP14.59□□□□□ -0.07
YIF1A-209ENST00000494836 FIG4Q92562 907 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 SLC35B4Q969S0 331 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 REXO5Q96IC2 774 aaKnown RBP14.59□□□□□ -0.07
YIF1A-209ENST00000494836 CTPS2Q9NRF8 586 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 CACNA1CQ13936 2221 aa14.59□□□□□ -0.07
YIF1A-209ENST00000494836 SETXQ7Z333 2677 aaKnown RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 DVL2O14641 736 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 CXCL13O43927 109 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 RCBTB2O95199 551 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 TMIGD3P0DMS9 266 aaPredicted RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 FCGR2AP12318 317 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 PRG2P13727 222 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 BMP5P22003 454 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 ACAA2P42765 397 aaKnown RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 SLC1A3P43003 542 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 ZNF136P52737 540 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 SLC25A35Q3KQZ1 300 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 OR2A2Q6IF42 318 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 ERICH5Q6P6B1 374 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 HACD2Q6Y1H2 254 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 PATL1Q86TB9 770 aaKnown RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 GCNT2Q8N0V5 402 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 ANKS4BQ8N8V4 417 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 INTS12Q96CB8 462 aaKnown RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 HOPXQ9BPY8 73 aaPredicted RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 GPATCH1Q9BRR8 931 aaKnown RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 KCNJ16Q9NPI9 418 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 TIGARQ9NQ88 270 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 KLHL28Q9NXS3 571 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 ZNF629Q9UEG4 869 aaPredicted RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 CHRNA9Q9UGM1 479 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 SLC13A4Q9UKG4 626 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 PRDM4Q9UKN5 801 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 MCTS1Q9ULC4 181 aaKnown RBP14.58□□□□□ -0.08
YIF1A-209ENST00000494836 AP3M1Q9Y2T2 418 aa14.58□□□□□ -0.08
YIF1A-209ENST00000494836 CCT8L1PA6NM43 557 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 FAM220BPB1ANY3 271 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 FRS3O43559 492 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 MFN2O95140 757 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 SYNGR4O95473 234 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 CTSSP25774 331 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 TACR3P29371 465 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 OPRM1P35372 400 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 POLR2HP52434 150 aaKnown RBP14.57□□□□□ -0.08
YIF1A-209ENST00000494836 CARD18P57730 90 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 DMTNQ08495 405 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 SYT14P1Q58G82 188 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 WBP2NLQ6ICG8 309 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 LIX1LQ8IVB5 337 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 CADM2Q8N3J6 435 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 SMYD1Q8NB12 490 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 OR2T12Q8NG77 320 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 OSTF1Q92882 214 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 ZNF583Q96ND8 569 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 OR5B2Q96R09 309 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 SFXN3Q9BWM7 321 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 PRRG4Q9BZD6 226 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 UCK2Q9BZX2 261 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 COQ10BQ9H8M1 238 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 CHST11Q9NPF2 352 aa14.57□□□□□ -0.08
YIF1A-209ENST00000494836 TMED7-TICAM2A0A0A6YYA0 188 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 NKX2-6A6NCS4 301 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 M0QX08 132 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 TPST1O60507 370 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 GCM2O75603 506 aaPredicted RBP14.56□□□□□ -0.08
YIF1A-209ENST00000494836 IL18BPO95998 194 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 OPN1SWP03999 348 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 TFPIP10646 304 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 FKBP2P26885 142 aaKnown RBP14.56□□□□□ -0.08
YIF1A-209ENST00000494836 SLC7A2P52569 658 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 FOXF2Q12947 444 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 VEZF1Q14119 521 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 GLIPR1L2Q4G1C9 344 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 COMTD1Q86VU5 262 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 ADGRG3Q86Y34 549 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 SLC15A3Q8IY34 581 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 CCDC197Q8NCU1 140 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 SLC26A7Q8TE54 656 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 CPNE4Q96A23 557 aaPredicted RBP14.56□□□□□ -0.08
YIF1A-209ENST00000494836 RSPO3Q9BXY4 272 aaPredicted RBP14.56□□□□□ -0.08
YIF1A-209ENST00000494836 RNF122Q9H9V4 155 aa14.56□□□□□ -0.08
YIF1A-209ENST00000494836 CMTM6Q9NX76 183 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms