RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 B4GALT7Q9UBV7 327 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 KLHL21Q9UJP4 597 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 BLOC1S6Q9UL45 172 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 SPATA31E1Q6ZUB1 1445 aa3.25□□□□□ -1.89
SMC4-224ENST00000494612 A8MUI8 341 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 KIF2AO00139 706 aaPredicted RBP3.24□□□□□ -1.89
SMC4-224ENST00000494612 CLDN5O00501 218 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 CA1P00915 261 aaPredicted RBP3.24□□□□□ -1.89
SMC4-224ENST00000494612 OR8U8P0C7N1 319 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 BCKDHAP12694 445 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 CD1EP15812 388 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 CALB2P22676 271 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 EPHX2P34913 555 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 UGT1A3P35503 534 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 ACAA2P42765 397 aaKnown RBP3.24□□□□□ -1.89
SMC4-224ENST00000494612 RND3P61587 244 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 NADK2Q4G0N4 442 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 RABGAP1LQ5R372 815 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 DCST2Q5T1A1 773 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 UTF1Q5T230 341 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 CES3Q6UWW8 571 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 TRPM8Q7Z2W7 1104 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 ACOT1Q86TX2 421 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 SLC38A6Q8IZM9 456 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 LRRC43Q8N309 656 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 OR51G2Q8NGK0 314 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 OR13F1Q8NGS4 319 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 OR2T34Q8NGX1 318 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 OSTF1Q92882 214 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 OR5B2Q96R09 309 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 CYP2S1Q96SQ9 504 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 RIBC2Q9H4K1 309 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 FARSBQ9NSD9 589 aaKnown RBP3.24□□□□□ -1.89
SMC4-224ENST00000494612 IL17CQ9P0M4 197 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 GALPQ9UBC7 116 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 CYTH4Q9UIA0 394 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 GSTK1Q9Y2Q3 226 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 SPACA6W5XKT8 324 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 BRD4O60885 1362 aaPredicted RBP3.24□□□□□ -1.89
SMC4-224ENST00000494612 NHSQ6T4R5 1651 aa3.24□□□□□ -1.89
SMC4-224ENST00000494612 PAPPAQ13219 1627 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PPIAL4CA0A0B4J2A2 164 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 DHRS7CA6NNS2 312 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 BCL9O00512 1426 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 OR7A17O14581 309 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 CTAGE5O15320 804 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 ALOX5P09917 674 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PPIAL4GP0DN37 164 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 SERPINA2P20848 420 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 UQCRC2P22695 453 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PSMA2P25787 234 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PSMA5P28066 241 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 CA8P35219 290 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 SOX6P35712 828 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 RPL29P47914 159 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 STARP49675 285 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 P2RY4P51582 365 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PLA2G16P53816 162 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 MRPS11P82912 194 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 OTUD4Q01804 1114 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 NDUFA9Q16795 377 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 QSER1Q2KHR3 1735 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 TIGITQ495A1 244 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 GGTA1PQ4G0N0 100 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 ATF7IP2Q5U623 682 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PVRIGQ6DKI7 326 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 APTXQ7Z2E3 356 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 SERPINA9Q86WD7 417 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 APOBEC3FQ8IUX4 373 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 ZDHHC21Q8IVQ6 265 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 UBQLNLQ8IYU4 475 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 CEND1Q8N111 149 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 CTNNBL1Q8WYA6 563 aaPredicted RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 BADQ92934 168 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 MYLPFQ96A32 169 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 RAB7BQ96AH8 199 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 FAF2Q96CS3 445 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 CNOT6LQ96LI5 555 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 TSGA13Q96PP4 275 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 SLC6A7Q99884 636 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 FEM1AQ9BSK4 669 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 NXF5Q9H1B4 397 aaKnown RBP3.23□□□□□ -1.89
SMC4-224ENST00000494612 ELOVL3Q9HB03 270 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 FANCFQ9NPI8 374 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 PRR34Q9NV39 138 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 AATFQ9NY61 560 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMC4-224ENST00000494612 GNG12Q9UBI6 72 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 LCMT1Q9UIC8 334 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 TP53TG3Q9ULZ0 132 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 SNX6Q9UNH7 406 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 OARD1Q9Y530 152 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 MAB21L2Q9Y586 359 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 USP16Q9Y5T5 823 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 FLVCR1Q9Y5Y0 555 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 BTAF1O14981 1849 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 ADAMTS9Q9P2N4 1935 aa3.23□□□□□ -1.89
SMC4-224ENST00000494612 ARHGEF28Q8N1W1 1705 aaKnown RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 ADGRB1O14514 1584 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 TNS2Q63HR2 1409 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms