RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SLC25A53Q5H9E4 307 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 GALNT5Q7Z7M9 940 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 UBE2J2Q8N2K1 259 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 OR52N5Q8NH56 324 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 PSMA8Q8TAA3 256 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 TUBGCP3Q96CW5 907 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 MUCL1Q96DR8 90 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 SLC35G5Q96KT7 338 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 PPP1R36Q96LQ0 422 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 DUSP26Q9BV47 211 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 CACNG6Q9BXT2 260 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 EML4Q9HC35 981 aaKnown RBP11.16□□□□□ -0.62
SKA1-205ENST00000494518 ATAD3AQ9NVI7 634 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 ZDHHC2Q9UIJ5 367 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 B3GALT5Q9Y2C3 310 aa11.16□□□□□ -0.62
SKA1-205ENST00000494518 SULT2B1O00204 365 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 UGT2B17O75795 530 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 CSTAP01040 98 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 G6PDP11413 515 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 CCNA2P20248 432 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 COX5AP20674 150 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 RYKP34925 604 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 NUDT6P53370 316 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 FOXG1P55316 489 aaPredicted RBP11.15□□□□□ -0.62
SKA1-205ENST00000494518 IRX1P78414 480 aaPredicted RBP11.15□□□□□ -0.62
SKA1-205ENST00000494518 MAPK14Q16539 360 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 C9orf135Q5VTT2 229 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 OR4F3Q6IEY1 312 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 B3GLCTQ6Y288 498 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 C16orf62Q7Z3J2 963 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 C6orf120Q7Z4R8 191 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 PHC2Q8IXK0 858 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 RIMKLAQ8IXN7 391 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 CNPY4Q8N129 248 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 ZNF433Q8N7K0 673 aaPredicted RBP11.15□□□□□ -0.62
SKA1-205ENST00000494518 RAB8BQ92930 207 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 MOAP1Q96BY2 351 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 COQ8BQ96D53 544 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 PRPF18Q99633 342 aaKnown RBP11.15□□□□□ -0.62
SKA1-205ENST00000494518 C1QTNF6Q9BXI9 259 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 BHLHE41Q9C0J9 482 aaPredicted RBP11.15□□□□□ -0.62
SKA1-205ENST00000494518 LAT2Q9GZY6 243 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 L2HGDHQ9H9P8 463 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
SKA1-205ENST00000494518 NBEAL1Q6ZS30 2694 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 CIB4A0PJX0 185 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 OR5H1A6NKK0 313 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 CCT8L1PA6NM43 557 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ZNF724A8MTY0 619 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 E7EQL1 145 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 M0R1B8 84 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ETV2O00321 342 aaPredicted RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 TLX2O43763 284 aaPredicted RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 STX11O75558 287 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 LYPLA1O75608 230 aaPredicted RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 CPSF4O95639 269 aaKnown RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 THBS1P07996 1170 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 CREB1P16220 341 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 PRPS1L1P21108 318 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 SYT14P1Q58G82 188 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 TIMM23BQ5SRD1 257 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 AGAP6Q5VW22 663 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ABLIM2Q6H8Q1 611 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 TNFAIP8L2Q6P589 184 aaPredicted RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 SLC22A25Q6T423 547 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 TMPPEQ6ZT21 453 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ANKRD46Q86W74 232 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 OR4A15Q8NGL6 344 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ZNF563Q8TA94 476 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 TCP10LQ8TDR4 215 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ST8SIA1Q92185 356 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ARL8AQ96BM9 186 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ARL5BQ96KC2 179 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 OR11A1Q9GZK7 315 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 NMUR2Q9GZQ4 415 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 OR51I1Q9H343 314 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 PPCSQ9HAB8 311 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 BARX1Q9HBU1 254 aaPredicted RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 CTPS2Q9NRF8 586 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 ACER3Q9NUN7 267 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 FAIMQ9NVQ4 179 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 MKS1Q9NXB0 559 aa11.14□□□□□ -0.63
SKA1-205ENST00000494518 NOSIPQ9Y314 301 aaKnown RBP11.14□□□□□ -0.63
SKA1-205ENST00000494518 FAM234BA2RU67 622 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 CLDN24A6NM45 220 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 A8MV72 311 aaPredicted RBP11.13□□□□□ -0.63
SKA1-205ENST00000494518 C1QCP02747 245 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 OR12D1P0DN82 309 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 PGCP20142 388 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 NTF4P34130 210 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 CSNK2A1P68400 391 aaPredicted RBP11.13□□□□□ -0.63
SKA1-205ENST00000494518 ZNF141Q15928 474 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
SKA1-205ENST00000494518 ARHGAP11BQ3KRB8 267 aa11.13□□□□□ -0.63
SKA1-205ENST00000494518 DNAJC14Q6Y2X3 702 aaPredicted RBP11.13□□□□□ -0.63
SKA1-205ENST00000494518 EIF3MQ7L2H7 374 aaKnown RBP11.13□□□□□ -0.63
SKA1-205ENST00000494518 HIPK1Q86Z02 1210 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms