RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ERVK-6Q9BXR3 956 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DUSP16Q9BY84 665 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RIMS4Q9H426 269 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NXF3Q9H4D5 531 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF696Q9H7X3 374 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 KAT8Q9H7Z6 458 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 C10orf88Q9H8K7 445 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SP140LQ9H930 580 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 WDR54Q9H977 334 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 IL1RL2Q9HB29 575 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SEBOXQ9HB31 216 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 Q9N2K0 584 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NOX4Q9NPH5 578 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SAMSN1Q9NSI8 373 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ECHDC1Q9NTX5 307 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ACSS1Q9NUB1 689 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PLCXD1Q9NUJ7 323 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PTTG3PQ9NZH4 202 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF224Q9NZL3 707 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CLN8Q9UBY8 286 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TUBGCP4Q9UGJ1 667 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MRM2Q9UI43 246 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DAPK2Q9UIK4 370 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 EMCNQ9ULC0 261 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PAIP2BQ9ULR5 123 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 FAF1Q9UNN5 650 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 AP3M1Q9Y2T2 418 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 STARD10Q9Y365 291 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TMED7Q9Y3B3 224 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RIPK3Q9Y572 518 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NACADO15069 1562 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DCAF1Q9Y4B6 1507 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 AFF2P51816 1311 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MN1Q10571 1320 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CCDC182A6NF36 153 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GOLGA6L10A6NI86 522 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ERVV-1B6SEH8 477 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 NPIPA7E9PJI5 369 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 E9PQ18 207 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 H3BN98 237 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TIMM23O14925 209 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 XRCC2O43543 280 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SNX3O60493 162 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GMDSO60547 372 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PFKFB2O60825 505 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CRLF1O75462 422 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 AP2A2O94973 939 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SCELO95171 688 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SNAPINO95295 136 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 BMP10O95393 424 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 DEXIO95424 95 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 F10P00742 488 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 FABP1P07148 127 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SNRPAP09012 282 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GSTA2P09210 222 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 NPIPA8P0DM63 369 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TFPIP10646 304 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 IRF2P14316 349 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF7P17097 686 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GOT1P17174 413 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CD58P19256 250 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 M6PRP20645 277 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MAOAP21397 527 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 UGT1A4P22310 534 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TEAD1P28347 426 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PPP2R1BP30154 601 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 UGT1A3P35503 534 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 UGT2B10P36537 528 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CFHR2P36980 270 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SLC26A3P40879 764 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TMPOP42166 694 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR3A3P47888 321 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RFX3P48380 749 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 NPY2RP49146 381 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RAP1GDS1P52306 607 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 EFNB2P52799 333 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LIMK2P53671 638 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 HMGCS2P54868 508 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RAB10P61026 200 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ERVK-25P63136 954 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LCN2P80188 198 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RBBP4Q09028 425 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SCRN3Q0VDG4 424 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF155Q12901 538 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MAD2L1Q13257 205 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MADCAM1Q13477 382 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GRB7Q14451 532 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PDK2Q15119 407 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TMED2Q15363 201 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SPHARQ15513 63 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TSC22D1Q15714 1073 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MRPL23Q16540 153 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CDKN3Q16667 212 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 IMPG1Q17R60 797 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 EXOC3L4Q17RC7 722 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF699Q32M78 642 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CCDC153Q494R4 210 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ACSF3Q4G176 576 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 AKIRIN2Q53H80 203 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PAN3Q58A45 887 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms