RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KLHL12Q53G59 568 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 DMKNQ6E0U4 476 aaPredicted RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 ULK3Q6PHR2 472 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 ZC3H14Q6PJT7 736 aaKnown RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 FAM111BQ6SJ93 734 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 RNF44Q7L0R7 432 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 WDR53Q7Z5U6 358 aaPredicted RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 SLITRK4Q8IW52 837 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 TRIM48Q8IWZ4 208 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 TOMM5Q8N4H5 51 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 SLC37A3Q8NCC5 494 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 OR7G1Q8NGA0 311 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 OR10H4Q8NGA5 316 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 OR4E2Q8NGC2 313 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 OR14C36Q8NHC7 312 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 HGDQ93099 445 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 OR2A5Q96R48 311 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 CNN2Q99439 309 aaKnown RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 TEAD3Q99594 435 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 LMF2Q9BU23 707 aaKnown RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 ZCCHC4Q9H5U6 513 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 MKKSQ9NPJ1 570 aaPredicted RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 ENAMQ9NRM1 1142 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 UCKL1Q9NWZ5 548 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 B3GNT2Q9NY97 397 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 RPS6KB2Q9UBS0 482 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 MOSPD1Q9UJG1 213 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 CAMK2AQ9UQM7 478 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 YARS2Q9Y2Z4 477 aaKnown RBP10.63□□□□□ -0.71
RFC4-214ENST00000494047 CHST2Q9Y4C5 530 aa10.63□□□□□ -0.71
RFC4-214ENST00000494047 CD8B2A6NJW9 211 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SHISA7A6NL88 538 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 C4orf51C9J302 202 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 OGG1O15527 345 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 ZNF780AO75290 641 aaPredicted RBP10.62□□□□□ -0.71
RFC4-214ENST00000494047 RFPL3O75679 317 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 CH25HO95992 272 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 RAB40ALP0C0E4 278 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SLC35E2P0CK97 266 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 CD8BP10966 210 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 APEHP13798 732 aaKnown RBP10.62□□□□□ -0.71
RFC4-214ENST00000494047 ELK1P19419 428 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 TBXA2RP21731 343 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SLC2A5P22732 501 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 LCN1P31025 176 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 NBL1P41271 181 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 MAP3K8P41279 467 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 TGM4P49221 684 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 CENPAP49450 140 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 ADPRHP54922 357 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 RAB38P57729 211 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 FZD5Q13467 585 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 COL28A1Q2UY09 1125 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 PLA1AQ53H76 456 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 UBE2NLQ5JXB2 153 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 C1QTNF12Q5T7M4 302 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 VASNQ6EMK4 673 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SLC7A5P1Q8MH63 180 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SAMD12Q8N8I0 201 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 OR56B4Q8NH76 319 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 TRMT10AQ8TBZ6 339 aaKnown RBP10.62□□□□□ -0.71
RFC4-214ENST00000494047 RAB40AQ8WXH6 277 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 KAT2AQ92830 837 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 UCN3Q969E3 161 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 UPRTQ96BW1 309 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SLX1AQ9BQ83 275 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 PRR14Q9BWN1 585 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 DPH1Q9BZG8 443 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 QRSL1Q9H0R6 528 aaKnown RBP10.62□□□□□ -0.71
RFC4-214ENST00000494047 SLITRK2Q9H156 845 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 CHRDQ9H2X0 955 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 RERGLQ9H628 205 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 LMAN1LQ9HAT1 526 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 CTPS2Q9NRF8 586 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 SPATA2Q9UM82 520 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 GPR55Q9Y2T6 319 aaPredicted RBP10.62□□□□□ -0.71
RFC4-214ENST00000494047 KCNE3Q9Y6H6 103 aa10.62□□□□□ -0.71
RFC4-214ENST00000494047 FANCMQ8IYD8 2048 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 A0A0J9YY10 115 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 OR52A4PA6NMU1 304 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 SOCS6O14544 535 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 CDC42EP2O14613 210 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 PHYHO14832 338 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 ARPC3O15145 178 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 FCMRO60667 390 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 LALBAP00709 142 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 CSF2P04141 144 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 TACSTD2P09758 323 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 CHRNB1P11230 501 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 DRD1P21728 446 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 GALNSP34059 522 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 MNDAP41218 407 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 ARPC4P59998 168 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 DUSP2Q05923 314 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 MAP4K2Q12851 820 aa10.61□□□□□ -0.71
RFC4-214ENST00000494047 GPR68Q15743 365 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms