RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RNF165Q6ZSG1 346 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 MTDHQ86UE4 582 aaKnown RBP15.49■□□□□ 0.07
NUP50-218ENST00000493456 MEX3DQ86XN8 651 aaKnown RBP15.49■□□□□ 0.07
NUP50-218ENST00000493456 CNPY4Q8N129 248 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 C1orf162Q8NEQ5 155 aaPredicted RBP15.49■□□□□ 0.07
NUP50-218ENST00000493456 OR56A1Q8NGH5 318 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 PIGXQ8TBF5 258 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 TNFRSF12AQ9NP84 129 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 DCDC2Q9UHG0 476 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 FAF1Q9UNN5 650 aaPredicted RBP15.49■□□□□ 0.07
NUP50-218ENST00000493456 AMDHD2Q9Y303 409 aa15.49■□□□□ 0.07
NUP50-218ENST00000493456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.49■□□□□ 0.07
NUP50-218ENST00000493456 G3V2L1 256 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 DNPH1O43598 174 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 DNAJA2O60884 412 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 MRPL33O75394 65 aaKnown RBP15.48■□□□□ 0.07
NUP50-218ENST00000493456 TGFAP01135 160 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 ITGA5P08648 1049 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 ABHD2P08910 425 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 EFNA1P20827 205 aaPredicted RBP15.48■□□□□ 0.07
NUP50-218ENST00000493456 RPL38P63173 70 aaKnown RBP15.48■□□□□ 0.07
NUP50-218ENST00000493456 SKP2Q13309 424 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 SWI5Q1ZZU3 235 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 ZNF540Q8NDQ6 660 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 CLHC1Q8NHS4 586 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 TMEM234Q8WY98 164 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 C3orf49Q96BT1 292 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 NMUR2Q9GZQ4 415 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 LAT2Q9GZY6 243 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 QRSL1Q9H0R6 528 aaKnown RBP15.48■□□□□ 0.07
NUP50-218ENST00000493456 DCTN4Q9UJW0 460 aa15.48■□□□□ 0.07
NUP50-218ENST00000493456 SPIN1Q9Y657 262 aaPredicted RBP15.48■□□□□ 0.07
NUP50-218ENST00000493456 IGHV4-61A0A0C4DH41 118 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 PDLIM1O00151 329 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 WIPF1O43516 503 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 PMS2P2O95744 297 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 ZNF23P17027 643 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 HPCAL1P37235 193 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 RPL3P39023 403 aaKnown RBP15.47■□□□□ 0.07
NUP50-218ENST00000493456 CCT3P49368 545 aaKnown RBP15.47■□□□□ 0.07
NUP50-218ENST00000493456 SLC16A1P53985 500 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 SESN3P58005 492 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 DNAJB13P59910 316 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 SNRPD2P62316 118 aaKnown RBP15.47■□□□□ 0.07
NUP50-218ENST00000493456 MERTKQ12866 999 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 TP53BP2Q13625 1128 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 CR1LQ2VPA4 569 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 IQCCQ4KMZ1 466 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 RFTN2Q52LD8 501 aaPredicted RBP15.47■□□□□ 0.07
NUP50-218ENST00000493456 PDZK1Q5T2W1 519 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 CLEC6AQ6EIG7 209 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 WDR31Q8NA23 367 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 PSMA8Q8TAA3 256 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 IFT81Q8WYA0 676 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 SORCS2Q96PQ0 1159 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 THUMPD3Q9BV44 507 aaKnown RBP15.47■□□□□ 0.07
NUP50-218ENST00000493456 C1QTNF6Q9BXI9 259 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 GRPEL1Q9HAV7 217 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 GPATCH2Q9NW75 528 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 BAIAP2L1Q9UHR4 511 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 ATP6V1HQ9UI12 483 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 EMCNQ9ULC0 261 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 PTGDR2Q9Y5Y4 395 aa15.47■□□□□ 0.07
NUP50-218ENST00000493456 SERINC4A6NH21 518 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 SCAMP2O15127 329 aaKnown RBP15.46■□□□□ 0.07
NUP50-218ENST00000493456 GLRA3O75311 464 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 PGCP20142 388 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 ECHS1P30084 290 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 ETF1P62495 437 aaKnown RBP15.46■□□□□ 0.07
NUP50-218ENST00000493456 TGFBR3Q03167 851 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 SYT10Q6XYQ8 523 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 HOMEZQ8IX15 550 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 OR2T11Q8NH01 316 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 SFXN5Q8TD22 340 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 MOAP1Q96BY2 351 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 FBXO17Q96EF6 278 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 SLC17A5Q9NRA2 495 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 ACER3Q9NUN7 267 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 HDGFL3Q9Y3E1 203 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 KCNE3Q9Y6H6 103 aa15.46■□□□□ 0.07
NUP50-218ENST00000493456 ATP6V1G2-DDX39BF2Z307 99 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 ANKRD28O15084 1053 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 LSM1O15116 133 aaKnown RBP15.45■□□□□ 0.06
NUP50-218ENST00000493456 AK1P00568 194 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 FKBP2P26885 142 aaKnown RBP15.45■□□□□ 0.06
NUP50-218ENST00000493456 APOBEC1P41238 236 aaKnown RBP15.45■□□□□ 0.06
NUP50-218ENST00000493456 MAGEA8P43361 318 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 CARTPTQ16568 116 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 MST1LQ2TV78 715 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 SPDYE7PQ495Y7 208 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 CASP12Q6UXS9 341 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 C12orf54Q6X4T0 127 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 NATD1Q8N6N6 113 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 OR5P2Q8WZ92 322 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 FOXN4Q96NZ1 517 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 PLA2G12AQ9BZM1 189 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 PSMC3IPQ9P2W1 217 aaPredicted RBP15.45■□□□□ 0.06
NUP50-218ENST00000493456 UPB1Q9UBR1 384 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 CHRNA9Q9UGM1 479 aa15.45■□□□□ 0.06
NUP50-218ENST00000493456 ARFGEF3Q5TH69 2177 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms