RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CENPHQ9H3R5 247 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 MEAF6Q9HAF1 191 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 KCNK9Q9NPC2 374 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 FAIMQ9NVQ4 179 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 MARCOQ9UEW3 520 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-205ENST00000492851 HDGFL3Q9Y3E1 203 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 VPS13CQ709C8 3753 aa11.06□□□□□ -0.64
COL6A1-205ENST00000492851 FLNAP21333 2647 aaKnown RBP11.05□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF814B7Z6K7 855 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 E9PBE3 544 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 SLCO1B7G3V0H7 640 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 SMAD9O15198 467 aaKnown RBP11.05□□□□□ -0.64
COL6A1-205ENST00000492851 PMS2P2O95744 297 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 LY6G6DO95868 133 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 TFPIP10646 304 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 UQCRBP14927 111 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 RNF144AP50876 292 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-205ENST00000492851 ATP5J2P56134 94 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 KCNJ10P78508 379 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 GPAT3Q53EU6 434 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 TIMM23BQ5SRD1 257 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 C1QTNF12Q5T7M4 302 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 SAXO2Q658L1 398 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 ALKBH2Q6NS38 261 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 ARFGAP2Q8N6H7 521 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 GLB1L3Q8NCI6 653 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-205ENST00000492851 FAM71CQ8NEG0 241 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 CCDC115Q96NT0 180 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 TRNT1Q96Q11 434 aaKnown RBP11.05□□□□□ -0.64
COL6A1-205ENST00000492851 PANX1Q96RD7 426 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 ZBTB18Q99592 522 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 SLC35A5Q9BS91 424 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 NUF2Q9BZD4 464 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 SERHL2Q9H4I8 314 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 MTHFD2LQ9H903 347 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-205ENST00000492851 CHRNA9Q9UGM1 479 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 KCNE5Q9UJ90 142 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 LAMP3Q9UQV4 416 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 TRAPPC4Q9Y296 219 aa11.05□□□□□ -0.64
COL6A1-205ENST00000492851 IGKV3D-15A0A087WSY6 115 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 IGHV3-15A0A0B4J1V0 119 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 TRPC5OSA6NMA1 111 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 CLOCKO15516 846 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 KRT75O95678 551 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 PLAUP00749 431 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 GGT1P19440 569 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 BGNP21810 368 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 IDUAP35475 653 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 PPP2R2BQ00005 443 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 PPA1Q15181 289 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 MAPK14Q16539 360 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 ZSWIM7Q19AV6 140 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 FAM174BQ3ZCQ3 159 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 SPANXN4Q5MJ08 99 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 HHATQ5VTY9 493 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 Q71RC1 249 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 ANKRD46Q86W74 232 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 CLEC4FQ8N1N0 589 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 PIGXQ8TBF5 258 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 SMAP2Q8WU79 429 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 RAB8BQ92930 207 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 SORT1Q99523 831 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 PAIP2Q9BPZ3 127 aaKnown RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 CCDC106Q9BWC9 280 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 GRIP2Q9C0E4 1043 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 C20orf27Q9GZN8 174 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 QRSL1Q9H0R6 528 aaKnown RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 THAP1Q9NVV9 213 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 PARPBPQ9NWS1 579 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 ING1Q9UK53 422 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-205ENST00000492851 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
COL6A1-205ENST00000492851 CCDC154A6NI56 674 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 OVOL3O00110 214 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 SMAD7O15105 426 aaKnown RBP11.03□□□□□ -0.64
COL6A1-205ENST00000492851 HDAC3O15379 428 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF208O43345 1280 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 PGM3O95394 542 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 H6PDO95479 791 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 PGRP06401 933 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 RYKP34925 604 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 PHC1P78364 1004 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 CHRNEQ04844 493 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 GSTA3Q16772 222 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
COL6A1-205ENST00000492851 TNFAIP8L3Q5GJ75 292 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 OR7E24Q6IFN5 339 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 KLHL17Q6TDP4 642 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 LRRC74BQ6ZQY2 392 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF440Q8IYI8 595 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 UBE2J2Q8N2K1 259 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
COL6A1-205ENST00000492851 RAB3IL1Q8TBN0 382 aa11.03□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF75CPQ92670 426 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms