RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PRTGQ2VWP7 1150 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM176BQ3YBM2 270 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MRPL2Q5T653 305 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 C9orf135Q5VTT2 229 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CCBE1Q6UXH8 406 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 C3P1Q6ZMU1 363 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 NDUFAF7Q7L592 441 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ANKRD37Q7Z713 158 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLITRK4Q8IW52 837 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF619Q8N2I2 560 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM178AQ8NBL3 297 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC37A3Q8NCC5 494 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 OR8J3Q8NGG0 315 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 OR6K6Q8NGW6 343 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TSPEARQ8WU66 669 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 ASB9Q96DX5 294 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SLC35A4Q96G79 324 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 PYURFQ96I23 114 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 CDADC1Q9BWV3 514 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 POLR2J3Q9H1A7 115 aaKnown RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 SAV1Q9H4B6 383 aaPredicted RBP4.14□□□□□ -1.75
TRA2B-215ENST00000492417 GALNT9Q9HCQ5 603 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 BRD7Q9NPI1 651 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 FKBP14Q9NWM8 211 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 TAS2R10Q9NYW0 307 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MED31Q9Y3C7 131 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 PIEZO2Q9H5I5 2752 aa4.14□□□□□ -1.75
TRA2B-215ENST00000492417 MYO7BQ6PIF6 2116 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 B4E171 279 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 RNF13O43567 381 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 XPNPEP2O43895 674 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR7A10O76100 309 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR5F1O95221 314 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 CLIC3O95833 236 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 GNAO1P09471 354 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 LIFP15018 202 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 F8A1P23610 371 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 S100A2P29034 98 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 HOXC12P31275 282 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SOX3P41225 446 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 HTR2BP41595 481 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TSPAN7P41732 249 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 GPR4P46093 362 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 PMS2P3Q13401 168 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TBC1D25Q3MII6 688 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ANKDD1AQ495B1 522 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ACER2Q5QJU3 275 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 PDSS1Q5T2R2 415 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF585AQ6P3V2 769 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 XKRXQ6PP77 449 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 JAZF1Q86VZ6 243 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR10H5Q8NGA6 315 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 STON2Q8WXE9 905 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 GATA6Q92908 595 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 FBXL20Q96IG2 436 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MESP1Q9BRJ9 268 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TVP23BQ9NYZ1 205 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 BOKQ9UMX3 212 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM184BQ9Y519 407 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 KCNE3Q9Y6H6 103 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MN1Q10571 1320 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 HEATR5BQ9P2D3 2071 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 IQCMA0A1B0GVH7 501 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 CIB4A0PJX0 185 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 C4orf51C9J302 202 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 H0YJX3 145 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 KLRC4-KLRK1H3BQV0 150 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 L7N2F9 121 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 INMTO95050 263 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 WISP3O95389 354 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 AK1P00568 194 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 RAP2AP10114 183 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 LIPCP11150 499 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 HK1P19367 917 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 POU3F2P20265 443 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 RPL35P42766 123 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 RORCP51449 518 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TMBIM6P55061 237 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SIRPAP78324 504 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MS4A2Q01362 244 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MVKQ03426 396 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 RBBP4Q09028 425 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SRSF6Q13247 344 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 KIAA0040Q15053 153 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 C4orf46Q504U0 113 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 CRTC2Q53ET0 693 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 C1orf94Q6P1W5 598 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF773Q6PK81 442 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SPATC1Q76KD6 591 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MRGPREQ86SM8 312 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SHISA5Q8N114 240 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 BEST3Q8N1M1 668 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SVOPLQ8N434 492 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR11G2Q8NGC1 345 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR10G2Q8NGC3 310 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZFP90Q8TF47 636 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 APOBEC4Q8WW27 367 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 PPP1R14AQ96A00 147 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 HAVCR1Q96D42 359 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZFP3Q96NJ6 502 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms