RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 OR52J3Q8NH60 311 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CNRIP1Q96F85 164 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF681Q96N22 645 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 TRNT1Q96Q11 434 aaKnown RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 NIPSNAP1Q9BPW8 284 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ASF1BQ9NVP2 202 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 TEKT2Q9UIF3 430 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 N6AMT1Q9Y5N5 214 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SNX8Q9Y5X2 465 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CNTRLQ7Z7A1 2325 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 GNG14A0A1W2PPG7 69 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SYNDIG1LA6NDD5 238 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CENPXA8MT69 81 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ERAL1O75616 437 aaKnown RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 UGT2B17O75795 530 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 NEURL1O76050 574 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 CPMP14384 443 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 FEN1P39748 380 aaKnown RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 RNF4P78317 190 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 BIKQ13323 160 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ZNF267Q14586 743 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 TSTQ16762 297 aaKnown RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ZFP69Q49AA0 526 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ATAD3CQ5T2N8 411 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ARMC4Q5T2S8 1044 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ANGPTL8Q6UXH0 198 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SPATC1Q76KD6 591 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SLC44A2Q8IWA5 706 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 C9orf40Q8IXQ3 194 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SIMC1Q8NDZ2 872 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 OR4C15Q8NGM1 316 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 RIT1Q92963 219 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 RLIMQ9NVW2 624 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 C14orf119Q9NWQ9 140 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ERVK13-1Q9NX77 482 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 TAS2R9Q9NYW1 312 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 ERVK-19Q9WJR5 959 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 SPTA1P02549 2419 aa8.63□□□□□ -1.03
BRCA1-219ENST00000491747 PRRC2CQ9Y520 2896 aaKnown RBP8.63□□□□□ -1.03
BRCA1-219ENST00000491747 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 WWP2O00308 870 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 CTDSP2O14595 271 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 RGS5O15539 181 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 OR10H2O60403 315 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 GUCY1B2O75343 617 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 ITGA10O75578 1167 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 ZFAND5O76080 213 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 S1PR1P21453 382 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 SSTR4P31391 388 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 CRATP43155 626 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 RBBP4Q09028 425 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 MGAT2Q10469 447 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 GAB1Q13480 694 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 OR1C1Q15619 314 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 EXOC3L2Q2M3D2 409 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 FAM111BQ6SJ93 734 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 HSDL2Q6YN16 418 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TSEN54Q7Z6J9 526 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 NRARPQ7Z6K4 114 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 ASCC1Q8N9N2 400 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TP53INP1Q96A56 240 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TAAR6Q96RI8 345 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 KCNS3Q9BQ31 491 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 UTP23Q9BRU9 249 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 CNPPD1Q9BV87 410 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 SMURF1Q9HCE7 757 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 CLN6Q9NWW5 311 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 RELNP78509 3460 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TRAV17A0A0B4J275 112 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 ANKRD34BA5PLL1 514 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 RNASET2O00584 256 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 PRAMEF2O60811 474 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 OR2J2O76002 312 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 WISP2O76076 250 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 CCNB2O95067 398 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 IFNA14P01570 189 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 OPN1SWP03999 348 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TNFSF8P32971 234 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 GALNSP34059 522 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 DDOSTP39656 456 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 SLC37A1P57057 533 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 RUNX1T1Q06455 604 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 C2orf80Q0P641 193 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 GPR50Q13585 617 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 PTGES3Q15185 160 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 LTB4RQ15722 352 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 PRICKLE4Q2TBC4 344 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 FAM71E1Q6IPT2 247 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 GDPGP1Q6ZNW5 385 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 RNF130Q86XS8 419 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 OR4A15Q8NGL6 344 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 GEMIN6Q8WXD5 167 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 EXOSC8Q96B26 276 aaKnown RBP8.62□□□□□ -1.03
BRCA1-219ENST00000491747 OR5M11Q96RB7 305 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 FAIM2Q9BWQ8 316 aa8.62□□□□□ -1.03
BRCA1-219ENST00000491747 TRIM45Q9H8W5 580 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms