RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 SLC47A1Q96FL8 570 aa16.47■□□□□ 0.23
PRDM2-209ENST00000491134 SEPHS2Q99611 448 aa16.47■□□□□ 0.23
PRDM2-209ENST00000491134 PIGQQ9BRB3 760 aa16.47■□□□□ 0.23
PRDM2-209ENST00000491134 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
PRDM2-209ENST00000491134 POLR2J3Q9H1A7 115 aaKnown RBP16.47■□□□□ 0.23
PRDM2-209ENST00000491134 DENND2DQ9H6A0 471 aaPredicted RBP16.47■□□□□ 0.23
PRDM2-209ENST00000491134 C12orf10Q9HB07 376 aa16.47■□□□□ 0.23
PRDM2-209ENST00000491134 ZNF337Q9Y3M9 751 aa16.47■□□□□ 0.23
PRDM2-209ENST00000491134 TRGV5A0A0B4J1U4 118 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 CPSF4LA6NMK7 179 aaKnown RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 J3KTA2 159 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 AQP7O14520 342 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 CIB2O75838 187 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 PRB1P04280 392 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 TCEA1P23193 301 aaKnown RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 ELK4P28324 431 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 TACR3P29371 465 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 ERFP50548 548 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 COPZ1P61923 177 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 CRYZQ08257 329 aaKnown RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 PIN1Q13526 163 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 KPNB1Q14974 876 aaKnown RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 DCST1Q5T197 706 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 SWT1Q5T5J6 900 aaKnown RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 RAET1LQ5VY80 246 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 VASNQ6EMK4 673 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 DEF8Q6ZN54 512 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 DNAJA4Q8WW22 397 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 SLC38A4Q969I6 547 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 DHRS1Q96LJ7 313 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 PRRC1Q96M27 445 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 ZNF300Q96RE9 604 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 PRSS27Q9BQR3 290 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 UGT2B28Q9BY64 529 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 CTPS2Q9NRF8 586 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 AGPAT4Q9NRZ5 378 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 MAN2C1Q9NTJ4 1040 aa16.46■□□□□ 0.23
PRDM2-209ENST00000491134 CCM2LQ9NUG4 571 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-209ENST00000491134 TRAPPC13A5PLN9 417 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 FAM47E-STBD1D6RA91 191 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 LINC01387J3KSC0 135 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 hCG_2039718K7EN88 272 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 OR5F1O95221 314 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 RAP2AP10114 183 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 BMP7P18075 431 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 APOBEC1P41238 236 aaKnown RBP16.45■□□□□ 0.22
PRDM2-209ENST00000491134 HTR3AP46098 478 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 LHX2P50458 406 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 POLR2HP52434 150 aaKnown RBP16.45■□□□□ 0.22
PRDM2-209ENST00000491134 CDH12P55289 794 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 CLDN15P56746 228 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 HSF1Q00613 529 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 MERTKQ12866 999 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 FAM98BQ52LJ0 330 aaKnown RBP16.45■□□□□ 0.22
PRDM2-209ENST00000491134 ULK3Q6PHR2 472 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 WDR88Q6ZMY6 472 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 ZDHHC21Q8IVQ6 265 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 OFCC1Q8IZS5 231 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 ZNF843Q8N446 348 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 CPT1CQ8TCG5 803 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 ZNF426Q9BUY5 554 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 TMEM27Q9HBJ8 222 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 RIMS3Q9UJD0 308 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 KIAA1549Q9HCM3 1950 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 ZNF462Q96JM2 2506 aa16.45■□□□□ 0.22
PRDM2-209ENST00000491134 IGKV1D-42A0A075B6H8 117 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 TMED7-TICAM2A0A0A6YYA0 188 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 NPIPB7O75200 414 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 ACTL6AO96019 429 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 FABP3P05413 133 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 THRBP10828 461 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 EDN3P14138 238 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 RHCEP18577 417 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 SHC1P29353 583 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 YAP1P46937 504 aaKnown RBP16.44■□□□□ 0.22
PRDM2-209ENST00000491134 RAC1P63000 192 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 CHRNB3Q05901 458 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 GDF7Q7Z4P5 450 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 GHDCQ8N2G8 530 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 PIK3C3Q8NEB9 887 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 SLC41A3Q96GZ6 507 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 SFXN2Q96NB2 322 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 TIMP4Q99727 224 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 FUZQ9BT04 418 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 TMED7Q9Y3B3 224 aa16.44■□□□□ 0.22
PRDM2-209ENST00000491134 A0A087WUJ7 227 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 A0A1B0GTH9 108 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 TMEM72A0PK05 275 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 B8ZZF3 427 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 ZNHIT1O43257 154 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 CHP2O43745 196 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 DIRAS1O95057 198 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 MT-ND1P03886 318 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 ZNF708P17019 499 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 HOXB6P17509 224 aaKnown RBP16.43■□□□□ 0.22
PRDM2-209ENST00000491134 SLC7A1P30825 629 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 STARP49675 285 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 MAP2K6P52564 334 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 CLDN18P56856 261 aa16.43■□□□□ 0.22
PRDM2-209ENST00000491134 EGR4Q05215 589 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms