RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 THY1P04216 161 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 TACR3P29371 465 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 RRM2P31350 389 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 MAP2K6P52564 334 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 CDH12P55289 794 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 MERTKQ12866 999 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 DGCR6Q14129 220 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 TMEM44Q2T9K0 475 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 RAET1LQ5VY80 246 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 POC1BQ8TC44 478 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 SLC39A7Q92504 469 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 SLC38A4Q969I6 547 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 DCLRE1BQ9H816 532 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 REEP1Q9H902 201 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 RHCGQ9UBD6 479 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 OSGIN1Q9UJX0 560 aa16.87■□□□□ 0.29
MCF2L-230ENST00000491028 USP24Q9UPU5 2620 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 ELOA3DA6NLF2 546 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-230ENST00000491028 LINC01387J3KSC0 135 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 GNGT2O14610 69 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 GADD45GO95257 159 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 LYPD3O95274 346 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 ALDH6A1Q02252 535 aaKnown RBP16.86■□□□□ 0.29
MCF2L-230ENST00000491028 SLC10A1Q14973 349 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.86■□□□□ 0.29
MCF2L-230ENST00000491028 ELOA3BQ3SY89 546 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 RNFT1Q5M7Z0 435 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 PCSK4Q6UW60 755 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 FAM180AQ6UWF9 173 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 YRDCQ86U90 279 aaKnown RBP16.86■□□□□ 0.29
MCF2L-230ENST00000491028 Q8NA96 180 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 ELOA3Q8NG57 546 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 RNF217Q8TC41 542 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 LRTOMTQ8WZ04 291 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 TAAR6Q96RI8 345 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 BDH2Q9BUT1 245 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 SERINC1Q9NRX5 453 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 MAN2C1Q9NTJ4 1040 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 LYVE1Q9Y5Y7 322 aa16.86■□□□□ 0.29
MCF2L-230ENST00000491028 SPIN1Q9Y657 262 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-230ENST00000491028 A0A087WUJ7 227 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 TMED7-TICAM2A0A0A6YYA0 188 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 OR2M5A3KFT3 312 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 TNFRSF11BO00300 401 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 MGRN1O60291 552 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 CHMP24386 653 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 CXCR1P25024 350 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 FKBP2P26885 142 aaKnown RBP16.85■□□□□ 0.29
MCF2L-230ENST00000491028 GCKP35557 465 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 RBM34P42696 430 aaKnown RBP16.85■□□□□ 0.29
MCF2L-230ENST00000491028 HMGA2P52926 109 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 B3GALT5-AS1P59052 145 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 SELENBP1Q13228 472 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 RIPK1Q13546 671 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 RCN1Q15293 331 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 FGD3Q5JSP0 725 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 WIPI1Q5MNZ9 446 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-230ENST00000491028 C3orf33Q6P1S2 294 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 LINC00114Q6XXX2 140 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 PQLC1Q8N2U9 271 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 SLC25A43Q8WUT9 341 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-230ENST00000491028 HS6ST2Q96MM7 605 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 EPYCQ99645 322 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 NPAS1Q99742 590 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 PRSS27Q9BQR3 290 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 ZNF426Q9BUY5 554 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 LUZP4Q9P127 313 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 CHRNA9Q9UGM1 479 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 RPH3AQ9Y2J0 694 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-230ENST00000491028 TMED7Q9Y3B3 224 aa16.85■□□□□ 0.29
MCF2L-230ENST00000491028 SAMHD1Q9Y3Z3 626 aaKnown RBP16.85■□□□□ 0.29
MCF2L-230ENST00000491028 H0Y3Z8 333 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 ZNF208O43345 1280 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 HCN1O60741 890 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 IGHG3P01860 377 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 LIMS1P48059 325 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 GFRA1P56159 465 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 LY6DQ14210 128 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 CMPK2Q5EBM0 449 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 HMBOX1Q6NT76 420 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 C5orf46Q6UWT4 87 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 ADGRG3Q86Y34 549 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 NKAIN4Q8IVV8 208 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 SIAH3Q8IW03 269 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 LILRA2Q8N149 483 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 ACOT11Q8WXI4 607 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-230ENST00000491028 CENPNQ96H22 339 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-230ENST00000491028 SFXN2Q96NB2 322 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 UBL7Q96S82 380 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-230ENST00000491028 PKP2Q99959 881 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 FUZQ9BT04 418 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 TMEM43Q9BTV4 400 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 SLC19A3Q9BZV2 496 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 C6orf203Q9P0P8 240 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-230ENST00000491028 ITPR1Q14643 2758 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 ATMQ13315 3056 aa16.84■□□□□ 0.29
MCF2L-230ENST00000491028 SHISA8B8ZZ34 492 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 CELA3AP09093 270 aa16.83■□□□□ 0.28
MCF2L-230ENST00000491028 ANPEPP15144 967 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms