RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 NSMCE2Q96MF7 247 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 MTHFD2LQ9H903 347 aaPredicted RBP9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 SDHAF3Q9NRP4 125 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 ARMC1Q9NVT9 282 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 CALML5Q9NZT1 146 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 ABCG2Q9UNQ0 655 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 CAMK2AQ9UQM7 478 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 MRPS18CQ9Y3D5 142 aaKnown RBP9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 CACNA1CQ13936 2221 aa9.56□□□□□ -0.88
SCAMP4-208ENST00000489554 CRYBG3Q68DQ2 2970 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 PHF3Q92576 2039 aaKnown RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 CD8B2A6NJW9 211 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 C17orf51A8MQB3 221 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 C5orf58C9J3I9 102 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 H3BNX3 289 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 GSTA4O15217 222 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 UTS2O95399 124 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 OXSR1O95747 527 aaPredicted RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 IL2RAP01589 272 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 PABPC4LP0CB38 370 aaKnown RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 CPN1P15169 458 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 TBXA2RP21731 343 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 LCN1P31025 176 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 RFX3P48380 749 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 CLK3P49761 638 aaKnown RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 ATP12AP54707 1039 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 GAS1P54826 345 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 GNA13Q14344 377 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 CD226Q15762 336 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 FLYWCH1Q4VC44 716 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 KLHL26Q53HC5 615 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 PDZK1Q5T2W1 519 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 NSUN5P2Q63ZY6 315 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 DHRS4L2Q6PKH6 230 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 ZNF836Q6ZNA1 936 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 VTCN1Q7Z7D3 282 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 SMYD1Q8NB12 490 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 FAM71CQ8NEG0 241 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 OR4D11Q8NGI4 311 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 ZPLD1Q8TCW7 415 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 FAM162AQ96A26 154 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 NR1H4Q96RI1 486 aaPredicted RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 KLHDC3Q9BQ90 382 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 G6PC3Q9BUM1 346 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 CALHM2Q9HA72 323 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 TAS2R10Q9NYW0 307 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 PPP4R1LQ9P1A2 415 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 DKKL1Q9UK85 242 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 ZNF443Q9Y2A4 671 aaPredicted RBP9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 NINQ8N4C6 2090 aa9.55□□□□□ -0.88
SCAMP4-208ENST00000489554 PKDREJQ9NTG1 2253 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 MBD3L4A6NDZ8 208 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 MBD3L3A6NE82 208 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 TMEM247A6NEH6 219 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 MBD3L5A6NJ08 208 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 DVL2O14641 736 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 OIP5O43482 229 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 ADAM11O75078 769 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 PRKD3O94806 890 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 THBS1P07996 1170 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 NID1P14543 1247 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 TNFRSF1BP20333 461 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 DPP4P27487 766 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 PRKAR1BP31321 381 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 PEX19P40855 299 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 GFRA1P56159 465 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 DSCR4P56555 118 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 SELENOWP63302 87 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 KCNJ10P78508 379 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 HPCAP84074 193 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 FGFBP1Q14512 234 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 TRIP10Q15642 601 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 NPTX1Q15818 432 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 NRF1Q16656 503 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 DCST1Q5T197 706 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 RNF220Q5VTB9 566 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 TSPYL5Q86VY4 417 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 ARMC8Q8IUR7 673 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 LIX1LQ8IVB5 337 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 DMRTC2Q8IXT2 367 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 CLIP4Q8N3C7 705 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 PAPD5Q8NDF8 572 aaKnown RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 OR4K17Q8NGC6 315 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 OR52P1PQ8NH57 321 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 MBD3L2Q8NHZ7 208 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 CANT1Q8WVQ1 401 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 OIT3Q8WWZ8 545 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 ZNF524Q96C55 264 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 LRRC46Q96FV0 321 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 C7orf34Q96L11 122 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 LURAP1Q96LR2 239 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 TRIB1Q96RU8 372 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 ZNF607Q96SK3 696 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 ARHGDIGQ99819 225 aa9.54□□□□□ -0.88
SCAMP4-208ENST00000489554 HHATLQ9HCP6 504 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms