RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 CTSSP25774 331 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ADH6P28332 368 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 GRNP28799 593 aaKnown RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 PON3Q15166 354 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 MAPK11Q15759 364 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 TRMT5Q32P41 509 aaKnown RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 AP1ARQ63HQ0 302 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 REP15Q6BDI9 236 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 OR2A2Q6IF42 318 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 NANOGP8Q6NSW7 305 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ZNF836Q6ZNA1 936 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ESPNLQ6ZVH7 1005 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 SEM1Q6ZVN7 128 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 LIX1LQ8IVB5 337 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 MCEMP1Q8IX19 187 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ZNF440Q8IYI8 595 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 GCNT2Q8N0V5 402 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 CADM2Q8N3J6 435 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 CNEP1R1Q8N9A8 125 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 C9orf106Q8NAJ2 232 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 C11orf65Q8NCR3 313 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 OR10A6Q8NH74 314 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 OR10D3Q8NH80 312 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 OR2V1Q8NHB1 315 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 RP9Q8TA86 221 aaKnown RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 ST8SIA1Q92185 356 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 LRRC58Q96CX6 371 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 LRRC46Q96FV0 321 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ZNF845Q96IR2 970 aaPredicted RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 KLHL15Q96M94 604 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 SLC39A3Q9BRY0 314 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 NANOGQ9H9S0 305 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ACER3Q9NUN7 267 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 MCTS1Q9ULC4 181 aaKnown RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 ANGPT4Q9Y264 503 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 ZNF443Q9Y2A4 671 aaPredicted RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 MED12Q93074 2177 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 DOPEY1Q5JWR5 2465 aa9.92□□□□□ -0.82
NUP98-212ENST00000488828 SPTBN1Q01082 2364 aaKnown RBP9.92□□□□□ -0.82
NUP98-212ENST00000488828 PCNX3Q9H6A9 2034 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 A0A0J9YW62 118 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 CDHR4A6H8M9 788 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 MBD3L4A6NDZ8 208 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 MBD3L3A6NE82 208 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 MBD3L5A6NJ08 208 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 EEF1E1-BLOC1S5C9J1V9 151 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 AP3D1O14617 1153 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 SLC22A2O15244 555 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 EEF1E1O43324 174 aaKnown RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 EFNA2O43921 213 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 RCBTB2O95199 551 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 NPPAP01160 153 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 THBS1P07996 1170 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 ARAFP10398 606 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 COX4I1P13073 169 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 COX6B1P14854 86 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 ETS2P15036 469 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 PSMA4P25789 261 aaKnown RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 ELK4P28324 431 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 UQCRC1P31930 480 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 CEACAM8P31997 349 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 OPRM1P35372 400 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 APOBEC1P41238 236 aaKnown RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 SELPLGQ14242 412 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 ZSWIM7Q19AV6 140 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 SLC25A35Q3KQZ1 300 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 PRAMEF8Q5VWM4 474 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 PRAMEF7Q5VXH5 474 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 ZNF550Q7Z398 422 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 GGNQ86UU5 652 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 ARMC8Q8IUR7 673 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 CLIP4Q8N3C7 705 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 NAXEQ8NCW5 288 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 MBD3L2Q8NHZ7 208 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 FNDC9Q8TBE3 224 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 SLC26A7Q8TE54 656 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 FIG4Q92562 907 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 GTPBP3Q969Y2 492 aaKnown RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 RCN3Q96D15 328 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 OR5B2Q96R09 309 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 SPATA9Q9BWV2 254 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 TMEM38AQ9H6F2 299 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 EFCAB1Q9HAE3 211 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 BCL2L10Q9HD36 194 aa9.91□□□□□ -0.82
NUP98-212ENST00000488828 EXOSC3Q9NQT5 275 aaKnown RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 PAQR5Q9NXK6 330 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 DNAJB12Q9NXW2 375 aaKnown RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 ZNF629Q9UEG4 869 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 SPIN1Q9Y657 262 aaPredicted RBP9.91□□□□□ -0.82
NUP98-212ENST00000488828 SETXQ7Z333 2677 aaKnown RBP9.9□□□□□ -0.82
NUP98-212ENST00000488828 ICE1Q9Y2F5 2266 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 PRORSD1PA6NEY8 169 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 M0QX08 132 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 ADAMDEC1O15204 470 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 SNX3O60493 162 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 SMNDC1O75940 238 aaKnown RBP eCLIP9.9□□□□□ -0.82
NUP98-212ENST00000488828 PABPC4LP0CB38 370 aaKnown RBP9.9□□□□□ -0.82
NUP98-212ENST00000488828 FAM157BP0CG42 384 aa9.9□□□□□ -0.82
NUP98-212ENST00000488828 FCGR2AP12318 317 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms