RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 CPSF4O95639 269 aaKnown RBP13.54□□□□□ -0.24
TRIM50-203ENST00000488217 CD8AP01732 235 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 OR12D1P0DN82 309 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 UQCRC2P22695 453 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 EDNRAP25101 427 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 FKBP2P26885 142 aaKnown RBP13.54□□□□□ -0.24
TRIM50-203ENST00000488217 PGM1P36871 562 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 CDKN1AP38936 164 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 STK11Q15831 433 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 ATAD3BQ5T9A4 648 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 ANXA8L1Q5VT79 327 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 MAPK1IP1LQ8NDC0 245 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 KBTBD8Q8NFY9 601 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 OIT3Q8WWZ8 545 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 RADILQ96JH8 1075 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 DPY30Q9C005 99 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 GRIP2Q9C0E4 1043 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 ZNF350Q9GZX5 532 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 SAP130Q9H0E3 1048 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 OR51I1Q9H343 314 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.54□□□□□ -0.24
TRIM50-203ENST00000488217 CSPG4Q6UVK1 2322 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 DSCAMO60469 2012 aa13.54□□□□□ -0.24
TRIM50-203ENST00000488217 HIVEP2P31629 2446 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 IGKV3D-15A0A087WSY6 115 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 CENPVL1A0A0U1RR11 272 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 ANKRD28O15084 1053 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 THBS1P07996 1170 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 TFPIP10646 304 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 ACVR1BP36896 505 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 CLK1P49759 484 aaKnown RBP13.53□□□□□ -0.24
TRIM50-203ENST00000488217 PHC1P78364 1004 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 FAPQ12884 760 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 SYT14P1Q58G82 188 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 FBXW9Q5XUX1 488 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 TYW3Q6IPR3 259 aaKnown RBP13.53□□□□□ -0.24
TRIM50-203ENST00000488217 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.53□□□□□ -0.24
TRIM50-203ENST00000488217 ZNF433Q8N7K0 673 aaPredicted RBP13.53□□□□□ -0.24
TRIM50-203ENST00000488217 ZNF563Q8TA94 476 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 SLC25A43Q8WUT9 341 aaPredicted RBP13.53□□□□□ -0.24
TRIM50-203ENST00000488217 RAB8BQ92930 207 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 ROPN1LQ96C74 230 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 SLC35G5Q96KT7 338 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 PPP1R36Q96LQ0 422 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 TMEM109Q9BVC6 243 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 CCDC106Q9BWC9 280 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 SLCO5A1Q9H2Y9 848 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 POLE3Q9NRF9 147 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 FAIMQ9NVQ4 179 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 EMC3Q9P0I2 261 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 SLC35A3Q9Y2D2 325 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 WDR45Q9Y484 360 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
TRIM50-203ENST00000488217 USF3Q68DE3 2245 aa13.53□□□□□ -0.24
TRIM50-203ENST00000488217 OR5H1A6NKK0 313 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 SHISA9B4DS77 424 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 BIRC5O15392 142 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 IGHV4-39P01824 125 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 COX5AP20674 150 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 RYKP34925 604 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
TRIM50-203ENST00000488217 ABCE1P61221 599 aaKnown RBP13.52□□□□□ -0.25
TRIM50-203ENST00000488217 KCNJ10P78508 379 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 KRTAP1-1Q07627 177 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 PDCD2Q16342 344 aaPredicted RBP13.52□□□□□ -0.25
TRIM50-203ENST00000488217 DNM1P46Q6ZS02 220 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 ADGRG3Q86Y34 549 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 UBE2J2Q8N2K1 259 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 ZNF781Q8N8C0 355 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 TRAF4Q9BUZ4 470 aaPredicted RBP13.52□□□□□ -0.25
TRIM50-203ENST00000488217 ALG2Q9H553 416 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 CTPS2Q9NRF8 586 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.52□□□□□ -0.25
TRIM50-203ENST00000488217 TRAPPC4Q9Y296 219 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 NOSIPQ9Y314 301 aaKnown RBP13.52□□□□□ -0.25
TRIM50-203ENST00000488217 HDGFL3Q9Y3E1 203 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.25
TRIM50-203ENST00000488217 CIB4A0PJX0 185 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 ZNF716A6NP11 495 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 GPR171O14626 319 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 ABCD4O14678 606 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 NDUFS7O75251 213 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 PMS2P2O95744 297 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 IGHV3-9P01782 118 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 TP53P04637 393 aaPredicted RBP13.51□□□□□ -0.25
TRIM50-203ENST00000488217 SERPINE1P05121 402 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 NTF4P34130 210 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 CHRNEQ04844 493 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 CASP8Q14790 479 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 CHI3L2Q15782 390 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 AGAP6Q5VW22 663 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 SAXO2Q658L1 398 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 TNFAIP8L2Q6P589 184 aaPredicted RBP13.51□□□□□ -0.25
TRIM50-203ENST00000488217 EMBQ6PCB8 327 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms