RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ZNF44P15621 663 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 FAHP16930 419 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 AKAP5P24588 427 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 HTR2AP28223 471 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 VIPR1P32241 457 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CSF2RBP32927 897 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CEACAM6P40199 344 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 STAT5AP42229 794 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 MVDP53602 400 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 HCCSP53701 268 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CDH4P55283 916 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 GMFBP60983 142 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 UBE2IP63279 158 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 SNTB2Q13425 540 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 SMCO1Q147U7 214 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 PEA15Q15121 130 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 SSX2Q16385 188 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 NDUFA9Q16795 377 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZSWIM7Q19AV6 140 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 C9orf152Q5JTZ5 239 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 IDNKQ5T6J7 187 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARMC12Q5T9G4 340 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ATPAF1Q5TC12 328 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CYB5RLQ6IPT4 315 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 H3F3CQ6NXT2 135 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 SFXN4Q6P4A7 337 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 LCNL1Q6ZST4 164 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 PAQR9Q6ZVX9 377 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZFP82Q8N141 532 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 HDDC3Q8N4P3 179 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 TCEANCQ8N8B7 351 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 SIDT2Q8NBJ9 832 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 B3GALNT2Q8NCR0 500 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 REPS2Q8NFH8 660 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR13C4Q8NGS5 318 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 EEF1AKMT1Q8WVE0 214 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 TCTEX1D2Q8WW35 142 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 XAGE5Q8WWM1 108 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 PMM1Q92871 262 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 OSTF1Q92882 214 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CMTM3Q96MX0 182 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 TSSK3Q96PN8 268 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 WDR77Q9BQA1 342 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 MESP1Q9BRJ9 268 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF649Q9BS31 505 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 FUZQ9BT04 418 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ULBP1Q9BZM6 244 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CHIAQ9BZP6 476 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 TM6SF2Q9BZW4 377 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 AP5M1Q9H0R1 490 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 LMAN2LQ9H0V9 348 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ELOVL2Q9NXB9 296 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF629Q9UEG4 869 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 MSRAQ9UJ68 235 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CAMK2AQ9UQM7 478 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 TP53TG5Q9Y2B4 290 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 CBY1Q9Y3M2 126 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 OARD1Q9Y530 152 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARL5AQ9Y689 179 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 PIAS3Q9Y6X2 628 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 PLXNB2O15031 1838 aa4.4□□□□□ -1.71
CDC42BPA-213ENST00000488131 A0A0D9SG52 128 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ABHD14A-ACY1A0A1B0GW23 586 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 F5H5P2 479 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 J3KTA2 159 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MID1O15344 667 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 BCAT2O15382 392 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FGF16O43320 207 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PCDH7O60245 1069 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 PEX10O60683 326 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 NDUFS3O75489 264 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RBBP9O75884 186 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 BEST1O76090 585 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 SPDEFO95238 335 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 IFNW1P05000 195 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 C1QTNF9P0C862 333 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 INSRRP14616 1297 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAC2P15153 192 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TNFRSF1BP20333 461 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 DRD5P21918 477 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 LMO2P25791 158 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ITGA3P26006 1051 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ELAVL4P26378 380 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ABCD3P28288 659 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 GJA4P35212 333 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RPL3P39023 403 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FEN1P39748 380 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MNDAP41218 407 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 MAPK9P45984 424 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 NPBWR1P48145 328 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 TTPAP49638 278 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RBP2P50120 134 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 AP3S2P59780 193 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 CD81P60033 236 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB2AP61019 212 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 FAM189BP81408 668 aa4.39□□□□□ -1.71
CDC42BPA-213ENST00000488131 ACY1Q03154 408 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms