RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MED31Q9Y3C7 131 aa10.03□□□□□ -0.8
HDLBP-242ENST00000488013 TESMINQ9Y4I5 508 aa10.03□□□□□ -0.8
HDLBP-242ENST00000488013 LYVE1Q9Y5Y7 322 aa10.03□□□□□ -0.8
HDLBP-242ENST00000488013 IGF2RP11717 2491 aa10.02□□□□□ -0.8
HDLBP-242ENST00000488013 SCN2AQ99250 2005 aa10.02□□□□□ -0.8
HDLBP-242ENST00000488013 LRRC3CA6NJW4 275 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ERVH48-1M5A8F1 160 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 FFAR1O14842 300 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 OIP5O43482 229 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 OR2T1O43869 369 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TRAPPC6AO75865 159 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 CCNB2O95067 398 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 NTN1O95631 604 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 MT-ND1P03886 318 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ANXA8P13928 327 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ZNF24P17028 368 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 HK1P19367 917 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 GDF1P27539 372 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TACR3P29371 465 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 YAP1P46937 504 aaKnown RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 GPR85P60893 370 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 HOXC5Q00444 222 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 MERTKQ12866 999 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 SELENBP1Q13228 472 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 SLC10A1Q14973 349 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 MFSD13AQ14CX5 517 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TOMM20Q15388 145 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 FGD3Q5JSP0 725 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TTC33Q6PID6 262 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 MBOAT2Q6ZWT7 520 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TSEN54Q7Z6J9 526 aaKnown RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ATG4DQ86TL0 474 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 PACRGLQ8N7B6 248 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 OR6S1Q8NH40 331 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 RNF217Q8TC41 542 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 STK35Q8TDR2 534 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TMEM239Q8WW34 195 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 C3orf49Q96BT1 292 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 PSD2Q9BQI7 771 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 WFDC6Q9BQY6 131 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ZNF426Q9BUY5 554 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 TTTY12Q9BZ98 90 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ZNF703Q9H7S9 590 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-242ENST00000488013 ZNF556Q9HAH1 456 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 CHRNA9Q9UGM1 479 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 FBXL2Q9UKC9 423 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 SLC7A7Q9UM01 511 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 AKAP13Q12802 2813 aa10.02□□□□□ -0.81
HDLBP-242ENST00000488013 SH3PXD2BA1X283 911 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 A8MVM7 634 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 G3V3Y1 287 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 J3KTA2 159 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 CASQ2O14958 399 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-242ENST00000488013 HCN1O60741 890 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 ADAM11O75078 769 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 SEMA7AO75326 666 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 DIRAS1O95057 198 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 ZNF23P17027 643 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 GSTM3P21266 225 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 CHMP24386 653 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 LIMS1P48059 325 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 COX10Q12887 443 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 TRIP10Q15642 601 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 SNCBQ16143 134 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 MICAQ29983 383 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 RFX4Q33E94 735 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 ANKDD1AQ495B1 522 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 RAET1LQ5VY80 246 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 C3orf33Q6P1S2 294 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 ARSKQ6UWY0 536 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 LINC00114Q6XXX2 140 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 AMIGO2Q86SJ2 522 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 RBMXL3Q8N7X1 1067 aaKnown RBP10.01□□□□□ -0.81
HDLBP-242ENST00000488013 OR4C15Q8NGM1 316 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 OR14L1PQ8NHC6 308 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 PIGXQ8TBF5 258 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 SLC7A13Q8TCU3 470 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 GIPC3Q8TF64 312 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 DDIT4LQ96D03 193 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 RBM4BQ9BQ04 359 aaKnown RBP10.01□□□□□ -0.81
HDLBP-242ENST00000488013 RBM4Q9BWF3 364 aaKnown RBP10.01□□□□□ -0.81
HDLBP-242ENST00000488013 POTEKPQ9BYX7 375 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 NDEL1Q9GZM8 345 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 NTN4Q9HB63 628 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 OSGIN1Q9UJX0 560 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 MGAT4BQ9UQ53 548 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 TP53TG5Q9Y2B4 290 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 ORC6Q9Y5N6 252 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 PCSK5Q92824 1860 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 ASPMQ8IZT6 3477 aa10.01□□□□□ -0.81
HDLBP-242ENST00000488013 TMED7-TICAM2A0A0A6YYA0 188 aa10□□□□□ -0.81
HDLBP-242ENST00000488013 A0A0G2JMM0 328 aa10□□□□□ -0.81
HDLBP-242ENST00000488013 A0A1W2PPB8 328 aa10□□□□□ -0.81
HDLBP-242ENST00000488013 A0A1W2PRS3 328 aa10□□□□□ -0.81
HDLBP-242ENST00000488013 KIR3DP1A8MWS1 328 aa10□□□□□ -0.81
HDLBP-242ENST00000488013 TFECO14948 347 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms