RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FMO6PO60774 539 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 HSF2BPO75031 334 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 ECI2O75521 394 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 LALBAP00709 142 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 P04436 131 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 ABHD2P08910 425 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 PNMTP11086 282 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 PDHBP11177 359 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 CD34P28906 385 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 KLK7P49862 253 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 CHRNB3Q05901 458 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 CHI3L2Q15782 390 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 C1orf100Q5SVJ3 147 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 WASH2PQ6VEQ5 465 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 ACOT7LQ6ZUV0 252 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 STKLD1Q8NE28 680 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 OR52P1PQ8NH57 321 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 NAP1L3Q99457 506 aaPredicted RBP1.72□□□□□ -2.13
SMC4-219ENST00000487747 GAL3ST1Q99999 423 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 WRAP53Q9BUR4 548 aaKnown RBP1.72□□□□□ -2.13
SMC4-219ENST00000487747 OSBPL11Q9BXB4 747 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 CWC25Q9NXE8 425 aaPredicted RBP1.72□□□□□ -2.13
SMC4-219ENST00000487747 RNF222A6NCQ9 220 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 ANXA4P09525 319 aaPredicted RBP1.71□□□□□ -2.14
SMC4-219ENST00000487747 CUL1Q13616 776 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 EXOSC2Q13868 293 aaKnown RBP1.71□□□□□ -2.14
SMC4-219ENST00000487747 IYDQ6PHW0 289 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 PCP2Q8IVA1 136 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 CNTN4Q8IWV2 1026 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 NKAIN3Q8N8D7 197 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 FANK1Q8TC84 345 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 TAAR1Q96RJ0 339 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 RPAP3Q9H6T3 665 aaPredicted RBP1.71□□□□□ -2.14
SMC4-219ENST00000487747 PRMT8Q9NR22 394 aaPredicted RBP1.71□□□□□ -2.14
SMC4-219ENST00000487747 COMMD8Q9NX08 183 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 ZNF629Q9UEG4 869 aaPredicted RBP1.71□□□□□ -2.14
SMC4-219ENST00000487747 IL20RAQ9UHF4 553 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 CYTH4Q9UIA0 394 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 GGA2Q9UJY4 613 aa1.71□□□□□ -2.14
SMC4-219ENST00000487747 MUC6Q6W4X9 2439 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 A0A0G2JN53 185 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 LRRC30A6NM36 301 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 IDSB3KWA1 339 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 ENTPD5O75356 428 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 RCBTB2O95199 551 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 LGI1O95970 557 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 CISD3P0C7P0 127 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 RBMY1CP0DJD4 496 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 NPY1RP25929 384 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 AKT2P31751 481 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 NUMBP49757 651 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 PLK1P53350 603 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 SELENOTP62341 195 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 STK11Q15831 433 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 FAM133BQ5BKY9 247 aaKnown RBP1.7□□□□□ -2.14
SMC4-219ENST00000487747 TMEM255AQ5JRV8 349 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 KLF17Q5JT82 389 aaPredicted RBP1.7□□□□□ -2.14
SMC4-219ENST00000487747 ZNF880Q6PDB4 577 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 TMEM26Q6ZUK4 368 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 VPS36Q86VN1 386 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 TMCO5AQ8N6Q1 288 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 WARS2Q9UGM6 360 aaKnown RBP1.7□□□□□ -2.14
SMC4-219ENST00000487747 RFNGQ9Y644 331 aa1.7□□□□□ -2.14
SMC4-219ENST00000487747 PHF3Q92576 2039 aaKnown RBP1.69□□□□□ -2.14
SMC4-219ENST00000487747 PCNX2A6NKB5 2137 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 TRAV40A0A0B4J280 105 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 RPL36A-HNRNPH2H7BZ11 118 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 B4GALT5O43286 388 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 VEGFDO43915 354 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 GOSR1O95249 250 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 GNA14O95837 355 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 CXCL5P42830 114 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 ENPEPQ07075 957 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 SNTB2Q13425 540 aaKnown RBP1.69□□□□□ -2.14
SMC4-219ENST00000487747 GRB7Q14451 532 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 GNMTQ14749 295 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 NEGR1Q7Z3B1 354 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 OR51S1Q8NGJ8 323 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 OR56B4Q8NH76 319 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 SNX21Q969T3 373 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 VCPKMTQ9H867 229 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 SMPD3Q9NY59 655 aaPredicted RBP1.69□□□□□ -2.14
SMC4-219ENST00000487747 TDRKHQ9Y2W6 561 aaKnown RBP1.69□□□□□ -2.14
SMC4-219ENST00000487747 CCDC7Q96M83 1385 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 MYO16Q9Y6X6 1858 aa1.69□□□□□ -2.14
SMC4-219ENST00000487747 IGKV1D-8A0A087WSZ0 117 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 A0A1B0GUL7 405 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 A6NIZ1 184 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 CD5LO43866 347 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 TPST2O60704 377 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 CXCL10P02778 98 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 ATP6V1B2P21281 511 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 RAP1BP61224 184 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 NTHL1P78549 312 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 PRSS8Q16651 343 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 ADPRMQ3LIE5 342 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 DNLZQ5SXM8 178 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 FRMPD2BQ6IN97 320 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 NANOGP8Q6NSW7 305 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 CAMK2N1Q7Z7J9 78 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms