RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CHRNB3Q05901 458 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 CHIT1Q13231 466 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 ISXQ2M1V0 245 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 EXOC3L2Q2M3D2 409 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 SLC25A52Q3SY17 297 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 CFAP221Q4G0U5 840 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 BEND3Q5T5X7 828 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 CCDC137Q6PK04 289 aaKnown RBP2.55□□□□□ -2
SNRNP27-204ENST00000487029 CASC1Q6TDU7 716 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 TMEM110Q86TL2 294 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 PPP1R27Q86WC6 154 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 SVOPLQ8N434 492 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 C11orf42Q8N5U0 333 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 OR4D9Q8NGE8 314 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 TCTEX1D2Q8WW35 142 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 PIGCQ92535 297 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 MYO15BQ96JP2 1530 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 IL4I1Q96RQ9 567 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 ZNF184Q99676 751 aaPredicted RBP2.55□□□□□ -2
SNRNP27-204ENST00000487029 MAPKAP1Q9BPZ7 522 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 CNPY3Q9BT09 278 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 SPATA16Q9BXB7 569 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 SRXN1Q9BYN0 137 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 EHD1Q9H4M9 534 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 APMAPQ9HDC9 416 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 LCMT1Q9UIC8 334 aa2.55□□□□□ -2
SNRNP27-204ENST00000487029 ABCA7Q8IZY2 2146 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 ATAD2BQ9ULI0 1458 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 TUBAL3A6NHL2 446 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 ZFP92A6NM28 416 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 KIF2AO00139 706 aaPredicted RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 CXCL13O43927 109 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 SLITRK3O94933 977 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 KRTAP1-4P0C5Y4 121 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 HSMCR30P0CW71 290 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 IMPDH1P20839 514 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 LEPP41159 167 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 RGRP47804 291 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 TDO2P48775 406 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 UBE2HP62256 183 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 C1orf61Q13536 156 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 ELAVL3Q14576 367 aaKnown RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 TRIM16LQ309B1 348 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 C9orf129Q5T035 196 aaKnown RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 FHL5Q5TD97 284 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 TPGS2Q68CL5 300 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 ATL3Q6DD88 541 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 Q6ZPB1 254 aaPredicted RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 NLRP9Q7RTR0 991 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 HSD17B13Q7Z5P4 300 aaPredicted RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 ZNF584Q8IVC4 421 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 CCDC50Q8IVM0 306 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 VSTM4Q8IW00 320 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 NRMQ8IXM6 262 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 C14orf178Q8N769 122 aaPredicted RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 ATP6V0D2Q8N8Y2 350 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 OR10H4Q8NGA5 316 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 OR9A1PQ8NGU1 263 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 PAQR8Q8TEZ7 354 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 NEIL2Q969S2 332 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 COQ2Q96H96 371 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 CNOT6LQ96LI5 555 aaKnown RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 SMIM14Q96QK8 99 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 ZNF670Q9BS34 389 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 RNF126Q9BV68 326 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 NMUR2Q9GZQ4 415 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 VCX2Q9H322 139 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 LRRN3Q9H3W5 708 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 PTGES2Q9H7Z7 377 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 ISG20L2Q9H9L3 353 aaKnown RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 SMOXQ9NWM0 555 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 B4GALT7Q9UBV7 327 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 DCDC2Q9UHG0 476 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 PHF11Q9UIL8 331 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 PTBP2Q9UKA9 531 aaKnown RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 UBQLN1Q9UMX0 589 aaKnown RBP2.54□□□□□ -2
SNRNP27-204ENST00000487029 ERVW-1Q9UQF0 538 aa2.54□□□□□ -2
SNRNP27-204ENST00000487029 TNRQ92752 1358 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 TRAV26-1A0A087WT03 109 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 VSTM2BA6NLU5 285 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 TRDCB7Z8K6 153 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 F5H6K3 240 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 HAT1O14929 419 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 OR10H3O60404 316 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 LYPD3O95274 346 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 LY6G6DO95868 133 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 IGHG4P01861 327 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 DBTP11182 482 aaKnown RBP2.53□□□□□ -2
SNRNP27-204ENST00000487029 POLR2EP19388 210 aaKnown RBP2.53□□□□□ -2
SNRNP27-204ENST00000487029 ZBTB25P24278 435 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 GRIA1P42261 906 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 CASP4P49662 377 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 DAP3P51398 398 aaKnown RBP2.53□□□□□ -2
SNRNP27-204ENST00000487029 EFNB2P52799 333 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 RPS8P62241 208 aaKnown RBP2.53□□□□□ -2
SNRNP27-204ENST00000487029 KLRC3Q07444 240 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 EGFEM1PQ0D2K5 195 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 CCDC173Q0VFZ6 552 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 KYAT1Q16773 422 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 RNF212Q495C1 297 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms