RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TMEM19Q96HH6 336 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 MS4A4EQ96PG1 132 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 TRNT1Q96Q11 434 aaKnown RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 PIP5K1AQ99755 562 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 ZNF559Q9BR84 538 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 EXO5Q9H790 373 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 ZNF703Q9H7S9 590 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 CACYBPQ9HB71 228 aaKnown RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 DDX18Q9NVP1 670 aaKnown RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 FAM118AQ9NWS6 357 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 NDUFAF4Q9P032 175 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 ABCG2Q9UNQ0 655 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 DTX4Q9Y2E6 619 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 SLC6A5Q9Y345 797 aa8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 GPC6Q9Y625 555 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 CHCHD2Q9Y6H1 151 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-208ENST00000486159 A0A087WXM4 84 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 DPPA5A6NC42 116 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 TTC36A6NLP5 189 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 hCG_2039718K7EN88 272 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 TNFRSF11BO00300 401 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SYT5O00445 386 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 BCKDKO14874 412 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 PLOD3O60568 738 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SNAP29O95721 258 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 OXSR1O95747 527 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 AK1P00568 194 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 HMGN2P05204 90 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 FBXO45P0C2W1 286 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SLC35E2P0CK97 266 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 OR12D1P0DN82 309 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 CD247P20963 164 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 IGFBP5P24593 272 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 AQP1P29972 269 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 GALNSP34059 522 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 RYKP34925 604 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SOX18P35713 384 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 FEN1P39748 380 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 KCNJ5P48544 419 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 ART1P52961 327 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 IST1P53990 364 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SLC37A1P57057 533 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 DUSP8Q13202 625 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 MYBPHQ13203 477 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 APOFQ13790 326 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 KEAP1Q14145 624 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 EBPQ15125 230 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 RBM48Q5RL73 367 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 DCST1Q5T197 706 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 C1orf185Q5T7R7 199 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 FNDC7Q5VTL7 733 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 CDC73Q6P1J9 531 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 POMZP3Q6PJE2 187 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SPNS3Q6ZMD2 512 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 WDR53Q7Z5U6 358 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 PIK3C3Q8NEB9 887 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 TSPAN14Q8NG11 270 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 GIPC3Q8TF64 312 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 XAGE5Q8WWM1 108 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 RIT1Q92963 219 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 FBXL20Q96IG2 436 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SGCZQ96LD1 299 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 GNRHR2Q96P88 292 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 PELOQ9BRX2 385 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 PINK1Q9BXM7 581 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 WWTR1Q9GZV5 400 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 TOR3AQ9H497 397 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 ZFP64Q9NPA5 681 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 POLE3Q9NRF9 147 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 PDP1Q9P0J1 537 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 COPS7AQ9UBW8 275 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 BLOC1S6Q9UL45 172 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 C19orf53Q9UNZ5 99 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 SLC9A8Q9Y2E8 581 aa8.53□□□□□ -1.04
TMEM39A-208ENST00000486159 HIVEP1P15822 2718 aa8.52□□□□□ -1.04
TMEM39A-208ENST00000486159 LOC100130705A0A1B0GUX0 176 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 OR14I1A6ND48 311 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 TRIM64CA6NLI5 447 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SUSD5O60279 629 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 OR10H2O60403 315 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 COQ9O75208 318 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 FESP07332 822 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 PABPC4LP0CB38 370 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SMIM18P0DKX4 95 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 RRM2P31350 389 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 TTKP33981 857 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 MC3RP41968 323 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SH3BGRP55822 239 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 CSNK2BP67870 215 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 LASP1Q14847 261 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 MAPK11Q15759 364 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 NNATQ16517 81 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF628Q5EBL2 1059 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 AP1ARQ63HQ0 302 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 HEPHL1Q6MZM0 1159 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 MFSD12Q6NUT3 480 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 FAM111BQ6SJ93 734 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 TMEM107Q6UX40 140 aa8.52□□□□□ -1.05
TMEM39A-208ENST00000486159 SZRD1Q7Z422 152 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms