RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 SLC35B4Q969S0 331 aa13.96□□□□□ -0.17
RPUSD3-217ENST00000485705 CADM1Q9BY67 442 aaKnown RBP13.96□□□□□ -0.17
RPUSD3-217ENST00000485705 PRDM14Q9GZV8 571 aa13.96□□□□□ -0.17
RPUSD3-217ENST00000485705 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
RPUSD3-217ENST00000485705 BAG5Q9UL15 447 aa13.96□□□□□ -0.17
RPUSD3-217ENST00000485705 SNX13Q9Y5W8 968 aa13.96□□□□□ -0.17
RPUSD3-217ENST00000485705 INTS1Q8N201 2190 aaKnown RBP13.96□□□□□ -0.18
RPUSD3-217ENST00000485705 FLNCQ14315 2725 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 KDM4EB2RXH2 506 aaPredicted RBP13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 LINC01387J3KSC0 135 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 J3QKU1 62 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 UQCRBP14927 111 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 CPN1P15169 458 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 CCNA2P20248 432 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 ME2P23368 584 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 SFTPDP35247 375 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 SLC1A3P43003 542 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 CA7P43166 264 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 NCALDP61601 193 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 RAC1P63000 192 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 RTL6Q6ICC9 239 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 PLXDC2Q6UX71 529 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 NCCRP1Q6ZVX7 275 aaPredicted RBP13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 GGNQ86UU5 652 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 ULK2Q8IYT8 1036 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 LILRA2Q8N149 483 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 RPRMLQ8N4K4 120 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 FAM86B1Q8N7N1 296 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 OR52E4Q8NGH9 312 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 ADAM19Q9H013 955 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 GORASP2Q9H8Y8 452 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 DCAF13Q9NV06 445 aaKnown RBP13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 MAGEL2Q9UJ55 1249 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 AP4B1Q9Y6B7 739 aa13.95□□□□□ -0.18
RPUSD3-217ENST00000485705 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 A0A0J9YW62 118 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 A0A1B0GWA3 101 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 EBAG9O00559 213 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 GSC2O15499 205 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 GMNNO75496 209 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 ATP5HO75947 161 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 ATP6V1B2P21281 511 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 ELK4P28324 431 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 APOBEC1P41238 236 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 POLR2HP52434 150 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 COPZ1P61923 177 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 BNIP2Q12982 314 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 OR1Q1Q15612 314 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 BCL2A1Q16548 175 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 CTU2Q2VPK5 515 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 PGM2L1Q6PCE3 622 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 CCDC121Q6ZUS5 278 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 C3orf49Q96BT1 292 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 CCDC124Q96CT7 223 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 HSH2DQ96JZ2 352 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 NSMCE2Q96MF7 247 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 MCHR1Q99705 422 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 TUBA1CQ9BQE3 449 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 ZNF559Q9BR84 538 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 ADPRHL2Q9NX46 363 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 V9GYQ6 96 aa13.94□□□□□ -0.18
RPUSD3-217ENST00000485705 USP9XQ93008 2570 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 TMEM72A0PK05 275 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 H0Y3Z8 333 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 EIF1AYO14602 144 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 SEMA7AO75326 666 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 SELENBP1Q13228 472 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 TRIM25Q14258 630 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 TMEM176BQ3YBM2 270 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 ENTPD8Q5MY95 495 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 CYP2R1Q6VVX0 501 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 RPTNQ6XPR3 784 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 FJX1Q86VR8 437 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 PM20D2Q8IYS1 436 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 LSMEM1Q8N8F7 131 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 LZICQ8WZA0 190 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 ZNF845Q96IR2 970 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 ADGRG7Q96K78 797 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 KLHL15Q96M94 604 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 TRIM2Q9C040 744 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 TP63Q9H3D4 680 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 EVA1AQ9H8M9 152 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 ACTR3BQ9P1U1 418 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 RPS6KA6Q9UK32 745 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 SLC9A8Q9Y2E8 581 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 FAM215AQ9Y5M1 114 aa13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 NCOA6Q14686 2063 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-217ENST00000485705 UBR5O95071 2799 aaPredicted RBP13.92□□□□□ -0.18
RPUSD3-217ENST00000485705 A0A1W2PNR3 127 aa13.92□□□□□ -0.18
RPUSD3-217ENST00000485705 ZC3H12DA2A288 527 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-217ENST00000485705 FIGNL2A6NMB9 653 aa13.92□□□□□ -0.18
RPUSD3-217ENST00000485705 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms