RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 LACC1Q8IV20 430 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 ZADH2Q8N4Q0 377 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 SVOPQ8N4V2 548 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 OR1N1Q8NGS0 311 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 GNPDA2Q8TDQ7 276 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 PIK3R3Q92569 461 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 PNPLA2Q96AD5 504 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 Q96MT0 163 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 SIGLEC12Q96PQ1 595 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 NODALQ96S42 347 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 MCHR1Q99705 422 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 TEX12Q9BXU0 123 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 DGCR6LQ9BY27 220 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 PRRG3Q9BZD7 231 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 KLHL1Q9NR64 748 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 ERVK-19Q9WJR5 959 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 OR10H1Q9Y4A9 318 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 CLCA3PQ9Y6N3 262 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 NCKAP5O14513 1909 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 HIVEP3Q5T1R4 2406 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 ZGRF1Q86YA3 2104 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 LRRK2Q5S007 2527 aa6.35□□□□□ -1.39
BRCA1-216ENST00000484087 TRBV11-1A0A0K0K1C0 115 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 SAGE2PA6NJ88 616 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CPSF4LA6NMK7 179 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 C17orf105B2RV13 164 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 TPST2O60704 377 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 KCNK2O95069 426 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 POU1F1P28069 291 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 KRT20P35900 424 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 MAP3K8P41279 467 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 RFX3P48380 749 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 GSK3AP49840 483 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 NR0B1P51843 470 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ALDH6A1Q02252 535 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 FUT7Q11130 342 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 TUBA3CQ13748 450 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF169Q14929 603 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CTU2Q2VPK5 515 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CNPY1Q3B7I2 92 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ENTPD8Q5MY95 495 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 PLAG1Q6DJT9 500 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 SPINK14Q6IE38 97 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF770Q6IQ21 691 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 PGBD2Q6P3X8 592 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 PODNL1Q6PEZ8 512 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 KLHL17Q6TDP4 642 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 IGFL2Q6UWQ7 119 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF836Q6ZNA1 936 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 HMGN2P46Q86SG4 172 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF614Q8N883 585 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF540Q8NDQ6 660 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 PLPP5Q8NEB5 264 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 NFAM1Q8NET5 270 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 OR4K5Q8NGD3 323 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 OR4D11Q8NGI4 311 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CNIH3Q8TBE1 160 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 PIGXQ8TBF5 258 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 SLC7A13Q8TCU3 470 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 TRUB1Q8WWH5 349 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 OIT3Q8WWZ8 545 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 HOXB13Q92826 284 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 DAZLQ92904 295 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 MYDGFQ969H8 173 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ZG16BQ96DA0 208 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 TAAR6Q96RI8 345 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 LPAR4Q99677 370 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 OR10A5Q9H207 317 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CDCP1Q9H5V8 836 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 TMEM27Q9HBJ8 222 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 RASSF1Q9NS23 344 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 RLIMQ9NVW2 624 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 CLN6Q9NWW5 311 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 SELENONQ9NZV5 590 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 C19orf25Q9UFG5 118 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 TESQ9UGI8 421 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 RSL24D1Q9UHA3 163 aaKnown RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 COMMD3-BMI1R4GMX3 469 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 RP1L1Q8IWN7 2480 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-216ENST00000484087 EXPH5Q8NEV8 1989 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 ESPL1Q14674 2120 aa6.34□□□□□ -1.39
BRCA1-216ENST00000484087 GXYLT2A0PJZ3 443 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SH3D21A4FU49 640 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 TRAPPC13A5PLN9 417 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SNTNA6NMZ2 147 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZAR1LA6NP61 321 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF701M0R085 212 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 FRS3O43559 492 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 RGS10O43665 173 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF354AO60765 605 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 FMO6PO60774 539 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 SEMA7AO75326 666 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 EPPINO95925 133 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 HPGDP15428 266 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 JUNBP17275 347 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-216ENST00000484087 S1PR1P21453 382 aa6.34□□□□□ -1.4
BRCA1-216ENST00000484087 RPS4Y1P22090 263 aaKnown RBP6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms