RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 APOBEC1P41238 236 aaKnown RBP20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 CRISP3P54108 245 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 KEAP1Q14145 624 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 AP1ARQ63HQ0 302 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 ANKRD34AQ69YU3 496 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 SLC2A7Q6PXP3 512 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 GRINAQ7Z429 371 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 TUSC5Q8IXB3 177 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 SLC43A2Q8N370 569 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 CNOT9Q92600 299 aaKnown RBP20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 TACO1Q9BSH4 297 aaKnown RBP20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 CCDC28BQ9BUN5 200 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 CTPS2Q9NRF8 586 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 CHRNA9Q9UGM1 479 aa20.98■□□□□ 0.95
RHBDF1-208ENST00000482904 NR5A2O00482 541 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 RAF1P04049 648 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 IDH2P48735 452 aaKnown RBP20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 MVDP53602 400 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 CSNK2A1P68400 391 aaPredicted RBP20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 MRPL2Q5T653 305 aaKnown RBP20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 SPNS3Q6ZMD2 512 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 PIK3IP1Q96FE7 263 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 GP6Q9HCN6 339 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 THUMPD1Q9NXG2 353 aaKnown RBP20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 SPG11Q96JI7 2443 aa20.97■□□□□ 0.95
RHBDF1-208ENST00000482904 SULT2B1O00204 365 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 AP3D1O14617 1153 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 FESP07332 822 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 NID1P14543 1247 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 RPS4Y1P22090 263 aaKnown RBP20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 CRYGSP22914 178 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 DIO1P49895 249 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 PLAURQ03405 335 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 LIN52Q52LA3 116 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 PMM1Q92871 262 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 ZHX1-C8orf76Q96EF9 292 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 CCDC106Q9BWC9 280 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 RAD21L1Q9H4I0 556 aa20.96■□□□□ 0.95
RHBDF1-208ENST00000482904 SMAD9O15198 467 aaKnown RBP20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 YES1P07947 543 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 PPP3CBP16298 524 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 CCNA2P20248 432 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 HTR3AP46098 478 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 MRPL19P49406 292 aaKnown RBP20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 TFAP2EQ6VUC0 442 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 STAC2Q6ZMT1 411 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 TMPPEQ6ZT21 453 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 NUFIP2Q7Z417 695 aaKnown RBP20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 OR52P1PQ8NH57 321 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 GTF2H4Q92759 462 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 FOXC2Q99958 501 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 PLEKHF2Q9H8W4 249 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 CCDC167Q9P0B6 97 aa20.95■□□□□ 0.94
RHBDF1-208ENST00000482904 CFAP73A6NFT4 308 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 DEFB108AA8MXU0 73 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 ADAM11O75078 769 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 RASGEF1BQ0VAM2 473 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 RPS26P11Q5JNZ5 115 aaPredicted RBP20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 ZNF836Q6ZNA1 936 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 ZNF440Q8IYI8 595 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 SLC38A5Q8WUX1 472 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 SPDL1Q96EA4 605 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 DNAJA3Q96EY1 480 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 TMEM19Q96HH6 336 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 MAGEB18Q96M61 343 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 PSD2Q9BQI7 771 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 ACTR6Q9GZN1 396 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 PAIP1Q9H074 479 aaKnown RBP20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 PCDHB14Q9Y5E9 798 aa20.94■□□□□ 0.94
RHBDF1-208ENST00000482904 A0A096LPI6 279 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 CLIC1O00299 241 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 CYTIPO60759 359 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 POLR2HP52434 150 aaKnown RBP20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 SQLEQ14534 574 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 MAPK11Q15759 364 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 VRK2Q86Y07 508 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 CKAP2Q8WWK9 683 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 THOC1Q96FV9 657 aaKnown RBP20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 OR11A1Q9GZK7 315 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 BCO1Q9HAY6 547 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 ZNF443Q9Y2A4 671 aaPredicted RBP20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 DSPPQ9NZW4 1301 aa20.93■□□□□ 0.94
RHBDF1-208ENST00000482904 TMED7-TICAM2A0A0A6YYA0 188 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 A0A1W2PPR1 153 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 C5orf58C9J3I9 102 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 SIAH2O43255 324 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 ATE1O95260 518 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 TFPTP0C1Z6 253 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 KLK2P20151 261 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 FKBP2P26885 142 aaKnown RBP20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 EPS8Q12929 822 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 FADDQ13158 208 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 LARS2Q15031 903 aaKnown RBP20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 RGNQ15493 299 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 BLOC1S3Q6QNY0 202 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 CXorf67Q86X51 503 aaPredicted RBP20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 DDIT4LQ96D03 193 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 ALPK1Q96QP1 1244 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 RLIMQ9NVW2 624 aa20.92■□□□□ 0.94
RHBDF1-208ENST00000482904 EMC3Q9P0I2 261 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms