RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 KLHL9Q9P2J3 617 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PRSS50Q9UI38 385 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 SLC35A3Q9Y2D2 325 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 RAI1Q7Z5J4 1906 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 SULT2B1O00204 365 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ETV2O00321 342 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 KLF4O43474 513 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 SMPD2O60906 423 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 SLC22A3O75751 556 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 LYZL6O75951 148 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ANP32DO95626 131 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ADAP00813 363 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 IGHV3-9P01782 118 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 BCHEP06276 602 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 YES1P07947 543 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 NR2F1P10589 423 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ETFAP13804 333 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 IDO1P14902 403 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 PSMB1P20618 241 aaKnown RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 IDH2P48735 452 aaKnown RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 RAC3P60763 192 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 NKX6-1P78426 367 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 RASGEF1BQ0VAM2 473 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 CAPRIN1Q14444 709 aaKnown RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 STK11Q15831 433 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ACKR1Q16570 336 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 PDCD4Q53EL6 469 aaKnown RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 BEX5Q5H9J7 111 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 RPS26P11Q5JNZ5 115 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 C6orf10Q5SRN2 563 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 MRPL2Q5T653 305 aaKnown RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF704Q6ZNC4 412 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 Q71RC1 249 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 GABRG1Q8N1C3 465 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 WDR60Q8WVS4 1066 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 VPS33AQ96AX1 596 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ARL8AQ96BM9 186 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ARL5BQ96KC2 179 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 CCDC106Q9BWC9 280 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 SAP130Q9H0E3 1048 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 FANCFQ9NPI8 374 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 DLL4Q9NR61 685 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ACER3Q9NUN7 267 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 CHRNA9Q9UGM1 479 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 ING1Q9UK53 422 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-212ENST00000482251 PRR14LQ5THK1 2151 aa9.3□□□□□ -0.92
CPSF4-212ENST00000482251 FREM1Q5H8C1 2179 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 ACANP16112 2415 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 AGAP5A6NIR3 686 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF814B7Z6K7 855 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 SLCO1B7G3V0H7 640 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 UBDO15205 165 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 CLOCKO15516 846 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 CYTIPO60759 359 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 DNAJA2O60884 412 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 PPP3CBP16298 524 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 HOXC12P31275 282 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 CRATP43155 626 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 ANXA11P50995 505 aaKnown RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 ABLIM2Q6H8Q1 611 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 TMPPEQ6ZT21 453 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 GRINAQ7Z429 371 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 VRK2Q86Y07 508 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 SLC43A2Q8N370 569 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 GLB1L3Q8NCI6 653 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 RAB3IL1Q8TBN0 382 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 PIWIL2Q8TC59 973 aaKnown RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 SLC25A43Q8WUT9 341 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF75CPQ92670 426 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 KISS1RQ969F8 398 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 MAELQ96JY0 434 aaKnown RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 TRNT1Q96Q11 434 aaKnown RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 TACO1Q9BSH4 297 aaKnown RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 BCO1Q9HAY6 547 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 SLCO1B3Q9NPD5 702 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 RLIMQ9NVW2 624 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 P2RX2Q9UBL9 471 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 GPR52Q9Y2T5 361 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 SPIN1Q9Y657 262 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
CPSF4-212ENST00000482251 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
CPSF4-212ENST00000482251 TMED7-TICAM2A0A0A6YYA0 188 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 TMEM72A0PK05 275 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 RAMP1O60894 148 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 KRT75O95678 551 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 IL6P05231 212 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 GKN3PP0CG01 181 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 IL7RP16871 459 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 FPR1P21462 350 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 RPS4Y1P22090 263 aaKnown RBP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 APOBEC1P41238 236 aaKnown RBP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 OR3A2P47893 321 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 POLR2JP52435 117 aaKnown RBP9.28□□□□□ -0.92
CPSF4-212ENST00000482251 MVDP53602 400 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 SLC18A1P54219 525 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 NR1H2P55055 460 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 OR2B6P58173 313 aa9.28□□□□□ -0.92
CPSF4-212ENST00000482251 CSNK2A1P68400 391 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms