RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ABTB1Q969K4 478 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-212ENST00000480461 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
TRA2B-212ENST00000480461 SH3GLB1Q9Y371 365 aa11.03□□□□□ -0.64
TRA2B-212ENST00000480461 CCDC168Q8NDH2 2452 aa11.03□□□□□ -0.64
TRA2B-212ENST00000480461 EBAG9O00559 213 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ATP5HO75947 161 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 LYPD3O95274 346 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 PGCP20142 388 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ATP6V1B2P21281 511 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ME2P23368 584 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 PTGS2P35354 604 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF41P51814 821 aaPredicted RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 CLDN18P56856 261 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 CLDN20P56880 219 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 TRIM25Q14258 630 aaKnown RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 IQCCQ4KMZ1 466 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 RAET1LQ5VY80 246 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 RTL6Q6ICC9 239 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ARHGAP11AQ6P4F7 1023 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ENPP6Q6UWR7 440 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 PLXDC2Q6UX71 529 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 Q6ZPB1 254 aaPredicted RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 PLEKHM3Q6ZWE6 761 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF550Q7Z398 422 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF440Q8IYI8 595 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 VANGL1Q8TAA9 524 aaPredicted RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 SLC26A7Q8TE54 656 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 PHF10Q8WUB8 498 aaKnown RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 SLC35B4Q969S0 331 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 UTP4Q969X6 686 aaKnown RBP11.02□□□□□ -0.65
TRA2B-212ENST00000480461 ZBTB8AQ96BR9 441 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 TPD52L3Q96J77 140 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 MRGPRX4Q96LA9 322 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 SFXN2Q96NB2 322 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 LRMDAQ9H2I8 198 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 HHATLQ9HCP6 504 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 CTPS2Q9NRF8 586 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 PNPLA3Q9NST1 481 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 OSGIN1Q9UJX0 560 aa11.02□□□□□ -0.65
TRA2B-212ENST00000480461 DIDO1Q9BTC0 2240 aaKnown RBP11.01□□□□□ -0.65
TRA2B-212ENST00000480461 TCRBV5S2A0A599 114 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 SLC19A2O60779 497 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 PRKD3O94806 890 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF682O95780 498 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ACTL6AO96019 429 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 CPN1P15169 458 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF708P17019 499 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ADH6P28332 368 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 TACR3P29371 465 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 SLC1A3P43003 542 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 SLC6A8P48029 635 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 DNAL1Q4LDG9 190 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 SP5Q6BEB4 398 aaPredicted RBP11.01□□□□□ -0.65
TRA2B-212ENST00000480461 CYP2R1Q6VVX0 501 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 C3P1Q6ZMU1 363 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 CCDC121Q6ZUS5 278 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 GGNQ86UU5 652 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 CARM1Q86X55 608 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ULK2Q8IYT8 1036 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 LSMEM1Q8N8F7 131 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 BHLHE22Q8NFJ8 381 aaPredicted RBP11.01□□□□□ -0.65
TRA2B-212ENST00000480461 TNIP2Q8NFZ5 429 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 OR52E4Q8NGH9 312 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF563Q8TA94 476 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 FAM57AQ8TBR7 257 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ST8SIA1Q92185 356 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 FAM162AQ96A26 154 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 C7orf34Q96L11 122 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 PIGQQ9BRB3 760 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 AMBRA1Q9C0C7 1298 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ARMC7Q9H6L4 198 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 EXO5Q9H790 373 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 TMEM185BQ9H7F4 350 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ACTR3BQ9P1U1 418 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 ACAD8Q9UKU7 415 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 OSGIN2Q9Y236 505 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 SVILO95425 2214 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 TACC2O95359 2948 aa11.01□□□□□ -0.65
TRA2B-212ENST00000480461 A0A0J9YW62 118 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 A0A1B0GWA3 101 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 OR14I1A6ND48 311 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 PRSS44E7EML9 344 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 H3BML4 177 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 FFAR1O14842 300 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 LRRTM2O43300 516 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 ZG16O60844 167 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 IFNA14P01570 189 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 SEMG1P04279 462 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 PEPDP12955 493 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF17P17021 662 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 CCNA2P20248 432 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 EIF1P41567 113 aaKnown RBP11□□□□□ -0.65
TRA2B-212ENST00000480461 PER3P56645 1201 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 RGS8P57771 180 aaPredicted RBP11□□□□□ -0.65
TRA2B-212ENST00000480461 RAC1P63000 192 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 SRYQ05066 204 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 MERTKQ12866 999 aa11□□□□□ -0.65
TRA2B-212ENST00000480461 BNIP2Q12982 314 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms