RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	LINC00696	Q6ZRV3	163 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	ZNF227	Q86WZ6	799 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	CDK20	Q8IZL9	346 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	CYP4Z2P	Q8N1L4	340 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	WDSUB1	Q8N9V3	476 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	ELOA3	Q8NG57	546 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	UBE2F	Q969M7	185 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	BPIFA2	Q96DR5	249 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	HRASLS5	Q96KN8	279 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	SGCZ	Q96LD1	299 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	NR1H4	Q96RI1	486 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	DPH1	Q9BZG8	443 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	CPNE5	Q9HCH3	593 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.2	□□□□□ -0.78
APTX-223	ENST00000479656	TEKT2	Q9UIF3	430 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	OSGIN1	Q9UJX0	560 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	WASF3	Q9UPY6	502 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	PCNX3	Q9H6A9	2034 aa		10.2	□□□□□ -0.78
APTX-223	ENST00000479656	EFS	O43281	561 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	KLF4	O43474	513 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	FPR3	P25089	353 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	MSX1	P28360	303 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	CD96	P40200	585 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	CTBP2	P56545	445 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	MYBPC1	Q00872	1141 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	KEAP1	Q14145	624 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	SPINK14	Q6IE38	97 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	ARSK	Q6UWY0	536 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	TMPRSS11F	Q6ZWK6	438 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	KIF18B	Q86Y91	864 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	GALNT16	Q8N428	558 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	GATA6	Q92908	595 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	FGF11	Q92914	225 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	FRMD6	Q96NE9	622 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	NPAS1	Q99742	590 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	ING2	Q9H160	280 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	EGLN3	Q9H6Z9	239 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	RYDEN	Q9NUL5	291 aa	Known RBP	10.19	□□□□□ -0.78
APTX-223	ENST00000479656	PLA2G3	Q9NZ20	509 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	AASS	Q9UDR5	926 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	ENOPH1	Q9UHY7	261 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	FBXL2	Q9UKC9	423 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	VDAC3	Q9Y277	283 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	IGKV1D-42	A0A075B6H8	117 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	IGLV3-32	A0A0A0MS00	114 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	ENO4	A6NNW6	628 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	KLK10	O43240	276 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656		P04436	131 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	CXCR1	P25024	350 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	CHN2	P52757	468 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	RRAD	P55042	308 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	SUMO3	P55854	103 aa	Predicted RBP	10.19	□□□□□ -0.78
APTX-223	ENST00000479656	ISL1	P61371	349 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	IL5RA	Q01344	420 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	RASSF6	Q6ZTQ3	369 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	THAP5	Q7Z6K1	395 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	ADGRG3	Q86Y34	549 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	CCDC71	Q8IV32	467 aa	Predicted RBP	10.19	□□□□□ -0.78
APTX-223	ENST00000479656	OR2M3	Q8NG83	312 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	KCNE4	Q8WWG9	221 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	TMEM234	Q8WY98	164 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	NTNG2	Q96CW9	530 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	CCNL2	Q96S94	520 aa	Predicted RBP	10.19	□□□□□ -0.78
APTX-223	ENST00000479656	PITX2	Q99697	317 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	LRFN1	Q9P244	771 aa		10.19	□□□□□ -0.78
APTX-223	ENST00000479656	DOCK10	Q96BY6	2186 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	EML6	Q6ZMW3	1958 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	ANKRD33B	A6NCL7	494 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	UNC119B	A6NIH7	251 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	ZAR1L	A6NP61	321 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	EFCAB9	A8MZ26	197 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	LRRN3	E7EW58	273 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	TLX3	O43711	291 aa	Predicted RBP	10.18	□□□□□ -0.78
APTX-223	ENST00000479656	WDPCP	O95876	746 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	LYN	P07948	512 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	SAG	P10523	405 aa	Predicted RBP	10.18	□□□□□ -0.78
APTX-223	ENST00000479656	PRKCA	P17252	672 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	ELK4	P28324	431 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	GGT2	P36268	569 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	CCL11	P51671	97 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	POLR2H	P52434	150 aa	Known RBP	10.18	□□□□□ -0.78
APTX-223	ENST00000479656	EGR4	Q05215	589 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	CD47	Q08722	323 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	IL18R1	Q13478	541 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	TUBA3C	Q13748	450 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	TUBA3E	Q6PEY2	450 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	GRINA	Q7Z429	371 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	PLCZ1	Q86YW0	608 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	GPALPP1	Q8IXQ4	340 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	FADS6	Q8N9I5	356 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	PSD4	Q8NDX1	1056 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	OR4K17	Q8NGC6	315 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	JSRP1	Q96MG2	331 aa	Predicted RBP	10.18	□□□□□ -0.78
APTX-223	ENST00000479656	GNRHR2	Q96P88	292 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	APOL4	Q9BPW4	351 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	UTP23	Q9BRU9	249 aa	Known RBP	10.18	□□□□□ -0.78
APTX-223	ENST00000479656	PLA2G12A	Q9BZM1	189 aa		10.18	□□□□□ -0.78
APTX-223	ENST00000479656	C12orf10	Q9HB07	376 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms