RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 OPN5Q6U736 354 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 DGLUCYQ7Z3D6 616 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 LSM14AQ8ND56 463 aaKnown RBP13.22□□□□□ -0.29
NPHP4-208ENST00000478423 SACM1LQ9NTJ5 587 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TRPM6Q9BX84 2022 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TRAV18A0A075B6X5 111 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TACR3P29371 465 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 MLLT11Q13015 90 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TMEM215Q68D42 235 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 FAM109BQ6ICB4 259 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TMEM150AQ86TG1 271 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 PLCZ1Q86YW0 608 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 ZFPM2Q8WW38 1151 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 LCORQ96JN0 433 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-208ENST00000478423 NRSN2Q9GZP1 204 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 TAS2R16Q9NYV7 291 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 GSKIPQ9P0R6 139 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 NUFIP1Q9UHK0 495 aaKnown RBP13.22□□□□□ -0.29
NPHP4-208ENST00000478423 PSORS1C1Q9UIG5 152 aa13.22□□□□□ -0.29
NPHP4-208ENST00000478423 KANTRA0A1W2PQU2 76 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 F5H5K5 113 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 CTDSP2O14595 271 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 SIGLEC6O43699 453 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 TOXO94900 526 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 PTHP01270 115 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
NPHP4-208ENST00000478423 MBOAT2Q6ZWT7 520 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 LRRC56Q8IYG6 542 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-208ENST00000478423 ENTHD1Q8IYW4 607 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 FAM71F1Q96KD3 344 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-208ENST00000478423 LINC00615Q96LM1 132 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-208ENST00000478423 NEDD4LQ96PU5 975 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 ULBP3Q9BZM4 244 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 EVA1AQ9H8M9 152 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 A6NL46 340 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 EFCAB7A8K855 629 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 BOLA2-SMG1P6H3BVE0 249 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 SRFP11831 508 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 DRD5P21918 477 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 BAIAP2L2Q6UXY1 529 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 SLC25A18Q9H1K4 315 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF225Q9UK10 706 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 ACOT7O00154 380 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 CPNE6O95741 557 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 GRK5P34947 590 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 DCDP81605 110 aaKnown RBP13.21□□□□□ -0.29
NPHP4-208ENST00000478423 CRMP1Q14194 572 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 CDNFQ49AH0 187 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 KDM4DQ6B0I6 523 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 FBXL6Q8N531 539 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.29
NPHP4-208ENST00000478423 SLC6A7Q99884 636 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 ARHGAP9Q9BRR9 750 aa13.21□□□□□ -0.29
NPHP4-208ENST00000478423 TEX13CA0A0J9YWL9 993 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 IFNA7P01567 189 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 AQP2P41181 271 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 HTR3AP46098 478 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 PITPNBP48739 271 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 SELENOVP59797 346 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 RNASE10Q5GAN6 216 aaKnown RBP13.21□□□□□ -0.3
NPHP4-208ENST00000478423 C1orf53Q5VUE5 145 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 FTMTQ8N4E7 242 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM255BQ8WV15 326 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.3
NPHP4-208ENST00000478423 SLC46A1Q96NT5 459 aa13.21□□□□□ -0.3
NPHP4-208ENST00000478423 CXorf51AA0A1B0GTR3 108 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 PLRG1O43660 514 aaKnown RBP13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF81P51508 661 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 S100A10P60903 97 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 LRRC37A5PQ49AS3 106 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 MUL1Q969V5 352 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SLC6A15Q9H2J7 730 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 LYRM4Q9HD34 91 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 A0A1B0GVC2 190 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 A6NIN4 97 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 AGAP5A6NIR3 686 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 RAD51DO75771 328 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 CD3GP09693 182 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 H2AFB2P0C5Z0 115 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 MMP11P24347 488 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 CD1CP29017 333 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 LCN1P31025 176 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 PRAMEF20Q5VT98 475 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 PYHIN1Q6K0P9 492 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 TIGD4Q8IY51 512 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF707Q96C28 371 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-208ENST00000478423 SYNPO2LQ9H987 977 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 DUSP22Q9NRW4 184 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 PLEK2Q9NYT0 353 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 MYEF2Q9P2K5 600 aaKnown RBP13.2□□□□□ -0.3
NPHP4-208ENST00000478423 LOC105369274A0A096LPK9 316 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 LOC102723532A0A0G2JNH3 316 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 PPM1DO15297 605 aa13.2□□□□□ -0.3
NPHP4-208ENST00000478423 PTTG1O95997 202 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms