RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ATP6V1HQ9UI12 483 aa8.49□□□□□ -1.05
CCM2-210ENST00000478169 NOSIPQ9Y314 301 aaKnown RBP8.49□□□□□ -1.05
CCM2-210ENST00000478169 PTGDR2Q9Y5Y4 395 aa8.49□□□□□ -1.05
CCM2-210ENST00000478169 KCNE3Q9Y6H6 103 aa8.49□□□□□ -1.05
CCM2-210ENST00000478169 PMF1-BGLAPU3KQ54 211 aa8.49□□□□□ -1.05
CCM2-210ENST00000478169 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SERINC4A6NH21 518 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 TMEM114B3SHH9 223 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 M0R1B8 84 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 NDUFS8O00217 210 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 GPR171O14626 319 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SCAMP2O15127 329 aaKnown RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 DNPH1O43598 174 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 PLIN3O60664 434 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 LINC00032P0C843 101 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 BCKDHAP12694 445 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 CPA3P15088 417 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 PGCP20142 388 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 FKBP2P26885 142 aaKnown RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 MAPK1P28482 360 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 APOBEC3AP31941 199 aaPredicted RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 CCR4P51679 360 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 CHRNEQ04844 493 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SPOCK1Q08629 439 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SKP2Q13309 424 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 TP53BP2Q13625 1128 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 GABRA6Q16445 453 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 GALNTL6Q49A17 601 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SYT14P1Q58G82 188 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 LIPMQ5VYY2 423 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 KANK2Q63ZY3 851 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 FAM166AQ6J272 317 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 B3GLCTQ6Y288 498 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 ARIH2OSQ8N7S6 290 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 NOA1Q8NC60 698 aaKnown RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 SFXN5Q8TD22 340 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 OR5P2Q8WZ92 322 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 MOAP1Q96BY2 351 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 ZHX1-C8orf76Q96EF9 292 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SDF2Q99470 211 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 TRMOQ9BU70 441 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 THUMPD3Q9BV44 507 aaKnown RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 FKRPQ9H9S5 495 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 ACER3Q9NUN7 267 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 ATAD3AQ9NVI7 634 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 MALT1Q9UDY8 824 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 TBK1Q9UHD2 729 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 KCNS2Q9ULS6 477 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 DNAJC15Q9Y5T4 150 aa8.48□□□□□ -1.05
CCM2-210ENST00000478169 SPIN1Q9Y657 262 aaPredicted RBP8.48□□□□□ -1.05
CCM2-210ENST00000478169 A0A1W2PPM1 405 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 DUXAA6NLW8 204 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 ZNF716A6NP11 495 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 VWC2LB2RUY7 222 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 MRPL33O75394 65 aaKnown RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 URI1O94763 535 aaPredicted RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 PMS2P2O95744 297 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 AK1P00568 194 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 IGHV3-9P01782 118 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 FGF4P08620 206 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 LAMP1P11279 417 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 HNF1AP20823 631 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 IGFBP5P24593 272 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 CRHR1P34998 444 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 APOBEC1P41238 236 aaKnown RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 CLK1P49759 484 aaKnown RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 PDLIM4P50479 330 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 SLC16A1P53985 500 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 SESN3P58005 492 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 MERTKQ12866 999 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 SQLEQ14534 574 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 ZNF141Q15928 474 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 SPDYE7PQ495Y7 208 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 FAM120AOSQ5T036 256 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 PDZK1Q5T2W1 519 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 LIPNQ5VXI9 398 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 BHLHB9Q6PI77 547 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 C17orf53Q8N3J3 647 aaPredicted RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 C17orf78Q8N4C9 275 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 MNS1Q8NEH6 495 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 OR7A2PQ8NGA2 310 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 PIGXQ8TBF5 258 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 OR7D2Q96RA2 312 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 PRPF18Q99633 342 aaKnown RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 QRSL1Q9H0R6 528 aaKnown RBP8.47□□□□□ -1.05
CCM2-210ENST00000478169 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 FIS1Q9Y3D6 152 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 FKBP7Q9Y680 259 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 ATP23Q9Y6H3 246 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 DYSFO75923 2080 aa8.47□□□□□ -1.05
CCM2-210ENST00000478169 LOC100289279A0A1B0GTE1 492 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 A0A1W2PR80 420 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 PDLIM1O00151 329 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 ANKRD28O15084 1053 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 STX11O75558 287 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 LYPLA1O75608 230 aaPredicted RBP8.46□□□□□ -1.06
CCM2-210ENST00000478169 CYP7B1O75881 506 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 C6orf47O95873 294 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 CSTAP01040 98 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms