RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 AK1P00568 194 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 DBIP07108 87 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SYPP08247 313 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TBC1D3HP0C7X1 549 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF888P0CJ79 500 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TRAPPC2P0DI81 140 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TRAPPC2BP0DI82 140 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 IL7P13232 177 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CPMP14384 443 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 HOXB2P14652 356 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 GNSP15586 552 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 PRKCAP17252 672 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 GALP22466 123 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CFL1P23528 166 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 PTBP1P26599 531 aaKnown RBP eCLIP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 HTR1FP30939 366 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SDC2P34741 201 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 PTGER1P34995 402 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SLC1A3P43003 542 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RPS5P46782 204 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 AVPR1BP47901 424 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 PDX1P52945 283 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RPS25P62851 125 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 PPP3R1P63098 170 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 EEF1A1P68104 462 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 DLX2Q07687 328 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SCN1BQ07699 218 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CD300CQ08708 224 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 HNRNPA0Q13151 305 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 DUSP8Q13202 625 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 LTB4RQ15722 352 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ARMC4Q5T2S8 1044 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 AADACL4Q5VUY2 407 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 NXNL2Q5VZ03 156 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 C22orf42Q6IC83 251 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TYW3Q6IPR3 259 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TBC1D3CQ6IPX1 549 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RPL13AP3Q6NVV1 102 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ANKRD54Q6NXT1 300 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZCCHC12Q6PEW1 402 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CD200R1LQ6Q8B3 271 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 FIGLAQ6QHK4 219 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 METAP1DQ6UB28 335 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ENPP7Q6UWV6 458 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM184AQ6ZMB5 413 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF836Q6ZNA1 936 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF620Q6ZNG0 422 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ABHD13Q7L211 337 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 GDF7Q7Z4P5 450 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 BCDIN3DQ7Z5W3 292 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 HMGN2P46Q86SG4 172 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 C11orf74Q86VG3 221 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RANBP3LQ86VV4 465 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RAB43Q86YS6 212 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 GID4Q8IVV7 300 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 UBQLNLQ8IYU4 475 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TBC1D3Q8IZP1 549 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RNF113BQ8IZP6 322 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF619Q8N2I2 560 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR2L13Q8N349 312 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 KLHL36Q8N4N3 616 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CISD2Q8N5K1 135 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF655Q8N720 491 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SUMF1Q8NBK3 374 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 IL17RDQ8NFM7 739 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR2T33Q8NG76 320 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR4E2Q8NGC2 313 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR4Q3Q8NH05 313 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR52N1Q8NH53 320 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZFPM2Q8WW38 1151 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR1E3Q8WZA6 343 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SLC9A6Q92581 669 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 RSC1A1Q92681 617 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 KAT2AQ92830 837 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CDS1Q92903 461 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TM4SF19Q96DZ7 209 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 TRMT61AQ96FX7 289 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SLC35A4Q96G79 324 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 OR2A14Q96R47 310 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 MYADMQ96S97 322 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 STACQ99469 402 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZFYVE21Q9BQ24 234 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 MACROD1Q9BQ69 325 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SPATA25Q9BR10 227 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SRRQ9GZT4 340 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 QRSL1Q9H0R6 528 aaKnown RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SRMSQ9H3Y6 488 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 FN3KQ9H479 309 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 PIGUQ9H490 435 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ANKRA2Q9H9E1 313 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 LYRM4Q9HD34 91 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CTPS2Q9NRF8 586 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 POLE3Q9NRF9 147 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 SACM1LQ9NTJ5 587 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 C14orf105Q9NVL8 296 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ASB6Q9NWX5 421 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ERVK13-1Q9NX77 482 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 CNIH4Q9P003 139 aa4.57□□□□□ -1.68
SF3B6-202ENST00000478050 H2AFY2Q9P0M6 372 aaPredicted RBP4.57□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF624Q9P2J8 865 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms