RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MAN2C1Q9NTJ4 1040 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 PRR34Q9NV39 138 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 VPS18Q9P253 973 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 GNPTGQ9UJJ9 305 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 FBXO5Q9UKT4 447 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 RAB23Q9ULC3 237 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 KMT2EQ8IZD2 1858 aa3.34□□□□□ -1.87
UBR3-209ENST00000477461 ATRXP46100 2492 aa3.34□□□□□ -1.88
UBR3-209ENST00000477461 PLXNB3Q9ULL4 1909 aa3.34□□□□□ -1.88
UBR3-209ENST00000477461 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.88
UBR3-209ENST00000477461 TDRD6O60522 2096 aaKnown RBP3.34□□□□□ -1.88
UBR3-209ENST00000477461 GON4LQ3T8J9 2241 aa3.34□□□□□ -1.88
UBR3-209ENST00000477461 ZDBF2Q9HCK1 2354 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TRBV5-4A0A0C4DH59 114 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TRBV5-5A0A0J9YX44 114 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 FAM159BA6NKW6 160 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 H3BMM5 538 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PRMT5O14744 637 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 RASGRF2O14827 1237 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RGS16O15492 202 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 LATO43561 262 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 VEGFDO43915 354 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 CDH16O75309 829 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 VPS26AO75436 327 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 CDK14O94921 469 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 FTH1P02794 183 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 IGHV4-34P06331 123 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 SNRPAP09012 282 aaKnown RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 NUDT17P0C025 328 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 SP9P0CG40 484 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 THEGLP0DJG4 465 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TDGF1P13385 188 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ATP1B2P14415 290 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 H2AFXP16104 143 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 VCLP18206 1134 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 BCKDHBP21953 392 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TEAD1P28347 426 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 GP5P40197 560 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PI4KAP42356 2102 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 NSG1P42857 185 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 SLC1A2P43004 574 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PTGER3P43115 390 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 SLCO1A2P46721 670 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RABIFP47224 123 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 KIAA1024LP59773 190 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 XIAPP98170 497 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TRAP1Q12931 704 aaKnown RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 SQLEQ14534 574 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ITIH4Q14624 930 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 CASP8Q14790 479 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 EFTUD2Q15029 972 aaKnown RBP eCLIP3.33□□□□□ -1.88
UBR3-209ENST00000477461 TMED2Q15363 201 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TYSND1Q2T9J0 566 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 WSCD2Q2TBF2 565 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 HSP90B2PQ58FF3 399 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 BEND6Q5SZJ8 279 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 GPRC6AQ5T6X5 926 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 WLSQ5T9L3 541 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PTRHD1Q6GMV3 140 aaKnown RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 FAM45BPQ6NSW5 357 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ENPP7Q6UWV6 458 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RFLNAQ6ZTI6 216 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ADCK2Q7Z695 626 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RABEPKQ7Z6M1 372 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TRAPPC5Q8IUR0 188 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 CNTN4Q8IWV2 1026 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RIBC1Q8N443 379 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 FAM89BQ8N5H3 189 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 FAM45AQ8TCE6 357 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 APOBEC4Q8WW27 367 aaKnown RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 ATXN7L3BQ96GX2 97 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ELMO2Q96JJ3 720 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ZNF514Q96K75 400 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 PKNOX2Q96KN3 472 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PANX3Q96QZ0 392 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 LPAR4Q99677 370 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RBBP8Q99708 897 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 APOOQ9BUR5 198 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 FUT8Q9BYC5 575 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ROPN1BQ9BZX4 212 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 OR2AG1Q9H205 316 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 RHOJQ9H4E5 214 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ROPN1Q9HAT0 212 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 PFDN4Q9NQP4 134 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 FBXO6Q9NRD1 293 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 SMOXQ9NWM0 555 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PSMC3IPQ9P2W1 217 aaPredicted RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 FETUBQ9UGM5 382 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TBK1Q9UHD2 729 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 TRMT6Q9UJA5 497 aaKnown RBP3.33□□□□□ -1.88
UBR3-209ENST00000477461 SNX7Q9UNH6 387 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 PPP1R3CQ9UQK1 317 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 CA5BQ9Y2D0 317 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 OR1A2Q9Y585 309 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 SDK1Q7Z5N4 2213 aa3.33□□□□□ -1.88
UBR3-209ENST00000477461 ZFC3H1O60293 1989 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 RANBP2P49792 3224 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 OR2AG2A6NM03 316 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 C15orf61A6NNL5 157 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 GPR89AB7ZAQ6 455 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms