RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ALOX5P09917 674 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 CSF3P09919 207 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 LYNX1P0DP58 116 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 HPGDP15428 266 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 SLC7A1P30825 629 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 GSTM5P46439 218 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 PKNOX1P55347 436 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 SESN3P58005 492 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 CAV1Q03135 178 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 LGALS3BPQ08380 585 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 SELENBP1Q13228 472 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 SKP2Q13309 424 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 PDE7AQ13946 482 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 VPS26BQ4G0F5 336 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 IQCCQ4KMZ1 466 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 TIGD2Q4W5G0 525 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 ATP6AP1LQ52LC2 224 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 CLEC6AQ6EIG7 209 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 TMPPEQ6ZT21 453 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 MYPOPQ86VE0 399 aaPredicted RBP8.5□□□□□ -1.05
COL4A5-204ENST00000477429 CARM1Q86X55 608 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 MISPQ8IVT2 679 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 MMGT1Q8N4V1 131 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 APH1AQ96BI3 265 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 FCRL1Q96LA6 429 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 TSSK3Q96PN8 268 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 PIMREGQ9BSJ6 248 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 THUMPD3Q9BV44 507 aaKnown RBP8.5□□□□□ -1.05
COL4A5-204ENST00000477429 OR11A1Q9GZK7 315 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 TUBB1Q9H4B7 451 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 SERHL2Q9H4I8 314 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 SLC7A10Q9NS82 523 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 MALT1Q9UDY8 824 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 TMEFF2Q9UIK5 374 aaPredicted RBP8.5□□□□□ -1.05
COL4A5-204ENST00000477429 UTP11Q9Y3A2 253 aaKnown RBP8.5□□□□□ -1.05
COL4A5-204ENST00000477429 IGHV1-18A0A0C4DH31 117 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 GJE1A6NN92 205 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 G3V2L1 256 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 SEC22BO75396 215 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 RSL1D1O76021 490 aaKnown RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 C1QCP02747 245 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 INHBAP08476 426 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 HNF1AP20823 631 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 ATP5F1P24539 256 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 ECHS1P30084 290 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 ASMTP46597 345 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 CCR4P51679 360 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 RPS26P62854 115 aaKnown RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 ADIPOQQ15848 244 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 MAPK14Q16539 360 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 RFTN2Q52LD8 501 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 HIKESHIQ53FT3 197 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 DCST2Q5T1A1 773 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 PDZK1Q5T2W1 519 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 TSPO2Q5TGU0 170 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 KLHL17Q6TDP4 642 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 DEF8Q6ZN54 512 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 RINLQ6ZS11 566 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 IKBIPQ70UQ0 350 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 HMGN2P46Q86SG4 172 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 CCNYL1Q8N7R7 359 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF614Q8N883 585 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 OR5W2Q8NH69 310 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 CEP70Q8NHQ1 597 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 SNX18Q96RF0 628 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 VRK1Q99986 396 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 PIGUQ9H490 435 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 HEATR1Q9H583 2144 aaKnown RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 REEP4Q9H6H4 257 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 GPATCH2Q9NW75 528 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 ASB6Q9NWX5 421 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 TAS2R16Q9NYV7 291 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 NOSIPQ9Y314 301 aaKnown RBP8.49□□□□□ -1.05
COL4A5-204ENST00000477429 DTNAQ9Y4J8 743 aa8.49□□□□□ -1.05
COL4A5-204ENST00000477429 LOC390937A0A1W2PQ73 354 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TMEM129A0AVI4 362 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 KIF2AO00139 706 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 GTPBP1O00178 669 aaKnown RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 SULT2B1O00204 365 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 NDUFS8O00217 210 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 WNT9BO14905 357 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 FCMRO60667 390 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TBX19O60806 448 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TACSTD2P09758 323 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 PGCP20142 388 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CALCRP30988 508 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 LCN1P31025 176 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 SRP14P37108 136 aaKnown RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 COMPP49747 757 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 ATP12AP54707 1039 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CDH15P55291 814 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 SUMO3P55854 103 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TUBA1BP68363 451 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TUBA4AP68366 448 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CHRNB3Q05901 458 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CCNIQ14094 377 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 MLC1Q15049 377 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 IMPG1Q17R60 797 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 MSMPQ1L6U9 139 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 SYT14P1Q58G82 188 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms