RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RIPPLY3P57055 190 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 KLRC3Q07444 240 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 FGL1Q08830 312 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 EGFEM1PQ0D2K5 195 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 KLRB1Q12918 225 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 GRB7Q14451 532 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 LRRC36Q1X8D7 754 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 TRIM16LQ309B1 348 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 GPRC6AQ5T6X5 926 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
VPS50-212ENST00000476413 TRPM8Q7Z2W7 1104 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 EFL1Q7Z2Z2 1120 aaKnown RBP4.33□□□□□ -1.72
VPS50-212ENST00000476413 LYG1Q8N1E2 194 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 NT5C3BQ969T7 300 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 SLC38A2Q96QD8 506 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 CCNL2Q96S94 520 aaPredicted RBP4.33□□□□□ -1.72
VPS50-212ENST00000476413 MYCBPQ99417 103 aaPredicted RBP4.33□□□□□ -1.72
VPS50-212ENST00000476413 ZNF184Q99676 751 aaPredicted RBP4.33□□□□□ -1.72
VPS50-212ENST00000476413 KLHDC3Q9BQ90 382 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 FN3KRPQ9HA64 309 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 TNFRSF19Q9NS68 423 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 PHF11Q9UIL8 331 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 KLHL21Q9UJP4 597 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 ADAM28Q9UKQ2 775 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 CHD4Q14839 1912 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 K7N7A8 449 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 OR10H3O60404 316 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 FCMRO60667 390 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 HCN1O60741 890 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 RAMP3O60896 148 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 B4GALT2O60909 372 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 SERF1AO75920 110 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 SCGNO76038 276 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 SLITRK3O94933 977 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 SEMG1P04279 462 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 OR8U8P0C7N1 319 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 CCDC166P0CW27 439 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 DBTP11182 482 aaKnown RBP4.32□□□□□ -1.72
VPS50-212ENST00000476413 AQP1P29972 269 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 PBLDP30039 288 aaPredicted RBP4.32□□□□□ -1.72
VPS50-212ENST00000476413 UGT1A5P35504 534 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 MAGEA8P43361 318 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
VPS50-212ENST00000476413 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
VPS50-212ENST00000476413 BCL2L1Q07817 233 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 KIAA0040Q15053 153 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 CCDC137Q6PK04 289 aaKnown RBP4.32□□□□□ -1.72
VPS50-212ENST00000476413 MOB1BQ7L9L4 216 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 DHDDSQ86SQ9 333 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 LCA5Q86VQ0 697 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 SLC35F2Q8IXU6 374 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 ATP6V0D2Q8N8Y2 350 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 OR13C2Q8NGS9 318 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 SCFD1Q8WVM8 642 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 MRPS31Q92665 395 aaKnown RBP4.32□□□□□ -1.72
VPS50-212ENST00000476413 NANSQ9NR45 359 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 TMEM9Q9P0T7 183 aa4.32□□□□□ -1.72
VPS50-212ENST00000476413 COL2A1P02458 1487 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 TUBAL3A6NHL2 446 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 TRIM64CA6NLI5 447 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 SNTNA6NMZ2 147 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 TRDCB7Z8K6 153 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 ECI2O75521 394 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 LYPLA1O75608 230 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 SNX4O95219 450 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 LALBAP00709 142 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 GCAP28676 217 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 PRKAR2BP31323 418 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 DUSP3P51452 185 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 SLC15A2Q16348 729 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 RABL6Q3YEC7 729 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 ZNF658Q5TYW1 1059 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 ATL3Q6DD88 541 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 N4BP2L2Q92802 583 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 FGGYQ96C11 551 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 YY1AP1Q9H869 796 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 HYPKQ9NX55 129 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 CLEC4EQ9ULY5 219 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 UBQLN1Q9UMX0 589 aaKnown RBP4.31□□□□□ -1.72
VPS50-212ENST00000476413 PLLPQ9Y342 182 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 AGRNO00468 2067 aa4.31□□□□□ -1.72
VPS50-212ENST00000476413 A0A1B0GUS0 222 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 E7ESA3 106 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 FOXE1O00358 373 aaPredicted RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 DIRAS1O95057 198 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 LGALS2P05162 132 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 NPR2P20594 1047 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 COX5AP20674 150 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 YWHABP31946 246 aaKnown RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 QARSP47897 775 aaKnown RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 CEBPDP49716 269 aaPredicted RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 SEC61GP60059 68 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 IGLV3-21P80748 117 aaPredicted RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 NCBP1Q09161 790 aaKnown RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 DDX39BQ13838 428 aaKnown RBP4.3□□□□□ -1.72
VPS50-212ENST00000476413 VGLL4Q14135 290 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 ZMYND11Q15326 602 aa4.3□□□□□ -1.72
VPS50-212ENST00000476413 DPYSL2Q16555 572 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms