RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 SEMA7AO75326 666 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 STAMBPO95630 424 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 SEMG1P04279 462 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 ZNF708P17019 499 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 POU3F2P20265 443 aaPredicted RBP20■□□□□ 0.79
MCF2L2-209ENST00000475664 CLDN18P56856 261 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 RBPJQ06330 500 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 SELENBP1Q13228 472 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 FLOT2Q14254 428 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 IGFBP7Q16270 282 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 BCL2A1Q16548 175 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 ENTPD8Q5MY95 495 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 DEF8Q6ZN54 512 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 ADGRG3Q86Y34 549 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 FAM57AQ8TBR7 257 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 TRIM15Q9C019 465 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 AMBRA1Q9C0C7 1298 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 PRDM14Q9GZV8 571 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 TMEM27Q9HBJ8 222 aa20■□□□□ 0.79
MCF2L2-209ENST00000475664 NBASA2RRP1 2371 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 TMED7-TICAM2A0A0A6YYA0 188 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 A0A0B4J2E0 115 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 A0A1B0GX12 115 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 IFNW1P05000 195 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 PEPDP12955 493 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 ABOP16442 354 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 RAC1P63000 192 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 MRPL49Q13405 166 aaKnown RBP19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 C3orf33Q6P1S2 294 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 ZNF613Q6PF04 617 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 POMZP3Q6PJE2 187 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 Q6ZPB1 254 aaPredicted RBP19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 ATG4DQ86TL0 474 aaPredicted RBP19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 WDYHV1Q96HA8 205 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 LRGUKQ96M69 825 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 TMEM185BQ9H7F4 350 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 C12orf10Q9HB07 376 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 RPS6KB2Q9UBS0 482 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 ACAD8Q9UKU7 415 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 TMED7Q9Y3B3 224 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 ZNF462Q96JM2 2506 aa19.99■□□□□ 0.79
MCF2L2-209ENST00000475664 AQP12BA6NM10 295 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 CPSF4LA6NMK7 179 aaKnown RBP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 SLC19A2O60779 497 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 CPN1P15169 458 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 SHC1P29353 583 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 C3AR1Q16581 482 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 EMC4Q5J8M3 183 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 WLSQ5T9L3 541 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 ULK3Q6PHR2 472 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 TSEN54Q7Z6J9 526 aaKnown RBP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 GGNQ86UU5 652 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 LSRQ86X29 649 aaPredicted RBP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 AQP12AQ8IXF9 295 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 LILRA2Q8N149 483 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 ADAMTS16Q8TE57 1224 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 DNAJA4Q8WW22 397 aaPredicted RBP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 SMPDL3BQ92485 455 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 C7orf34Q96L11 122 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 POLR2J2Q9GZM3 115 aaKnown RBP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 POLR2J3Q9H1A7 115 aaKnown RBP19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 SERINC1Q9NRX5 453 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 PNPLA3Q9NST1 481 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 CHRNA9Q9UGM1 479 aa19.98■□□□□ 0.79
MCF2L2-209ENST00000475664 TRAPPC13A5PLN9 417 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 LYPD3O95274 346 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 THY1P04216 161 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 TPOP07202 933 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 CDH12P55289 794 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 CLDN15P56746 228 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 CLDN20P56880 219 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 GXYLT1Q4G148 440 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 ALG10BQ5I7T1 473 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 SWT1Q5T5J6 900 aaKnown RBP19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 CD163Q86VB7 1156 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 ATCAYQ86WG3 371 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 SLC25A43Q8WUT9 341 aaPredicted RBP19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 POP5Q969H6 163 aaKnown RBP19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 PRRC1Q96M27 445 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 STOML1Q9UBI4 398 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 A4GNTQ9UNA3 340 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 SPIN1Q9Y657 262 aaPredicted RBP19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 ENPP4Q9Y6X5 453 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 MPDZO75970 2070 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 POLEQ07864 2286 aa19.97■□□□□ 0.79
MCF2L2-209ENST00000475664 TMEM72A0PK05 275 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 H0YC42 278 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 SEC14L5O43304 696 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 OR5F1O95221 314 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 CXCR1P25024 350 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 SFTPDP35247 375 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 MAP2K6P52564 334 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 SUCLG1P53597 346 aaKnown RBP19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 TPD52P55327 224 aaPredicted RBP19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 VLDLRP98155 873 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 PIN1Q13526 163 aaPredicted RBP19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 CTU2Q2VPK5 515 aaKnown RBP19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 IQCCQ4KMZ1 466 aa19.96■□□□□ 0.79
MCF2L2-209ENST00000475664 PM20D2Q8IYS1 436 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms