RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CRHBPP24387 322 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 MST1P26927 711 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 MSX1P28360 303 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 FMO3P31513 532 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 HLCSP50747 726 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 CXCR4P61073 352 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 CDK5Q00535 292 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.41
TRAF4-210ENST00000475329 Q0VFX4 171 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 GINS1Q14691 196 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 QPRTQ15274 297 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 COL28A1Q2UY09 1125 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 LAIR2Q6ISS4 152 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 RPL13AP3Q6NVV1 102 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 H3F3CQ6NXT2 135 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-210ENST00000475329 SLC27A4Q6P1M0 643 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 DTX1Q86Y01 620 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 TMEM156Q8N614 296 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 IQCF1Q8N6M8 205 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 FANK1Q8TC84 345 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ADAMTS17Q8TE56 1095 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 APH1BQ8WW43 257 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 SECISBP2Q96T21 854 aaKnown RBP12.52□□□□□ -0.41
TRAF4-210ENST00000475329 TMEM43Q9BTV4 400 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 TEX12Q9BXU0 123 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 PLA2G12AQ9BZM1 189 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ADAM19Q9H013 955 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 GALNT9Q9HCQ5 603 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ATP13A2Q9NQ11 1180 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 TUBA8Q9NY65 449 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-210ENST00000475329 DLL3Q9NYJ7 618 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ZNF226Q9NYT6 803 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 TAS2R10Q9NYW0 307 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 IL17BQ9UHF5 180 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 WIF1Q9Y5W5 379 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 IGLV3-32A0A0A0MS00 114 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 MASP2O00187 686 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 CDC42EP2O14613 210 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 MAN1A2O60476 641 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 HCN1O60741 890 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 FAM20BO75063 409 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 WBP4O75554 376 aaKnown RBP12.51□□□□□ -0.41
TRAF4-210ENST00000475329 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
TRAF4-210ENST00000475329 RCBTB2O95199 551 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 EEF1B2P24534 225 aaKnown RBP12.51□□□□□ -0.41
TRAF4-210ENST00000475329 TACR3P29371 465 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 PTGDSP41222 190 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 GIPRP48546 466 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 CDH15P55291 814 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 CSNK2BP67870 215 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 TUBA4AP68366 448 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 SNTA1Q13424 505 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 BICRALQ6AI39 1079 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 IL20RBQ6UXL0 311 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 PTCHD4Q6ZW05 846 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 BPIFB6Q8NFQ5 453 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 OR52L1Q8NGH7 329 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 OR8D4Q8NGM9 314 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 OR13C2Q8NGS9 318 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 RHOXF1Q8NHV9 184 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 BRIX1Q8TDN6 353 aaKnown RBP12.51□□□□□ -0.41
TRAF4-210ENST00000475329 GPR119Q8TDV5 335 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 TMEM234Q8WY98 164 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 UBE2FQ969M7 185 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 SGTBQ96EQ0 304 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 SLC38A2Q96QD8 506 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 KLHDC3Q9BQ90 382 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 TSSK6Q9BXA6 273 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 HPF1Q9NWY4 346 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 SCN3BQ9NY72 215 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 AASSQ9UDR5 926 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 TPRKBQ9Y3C4 175 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
TRAF4-210ENST00000475329 CHCHD2Q9Y6H1 151 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-210ENST00000475329 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 TRIM64CA6NLI5 447 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 M0R129 80 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 IGF2P01344 180 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 LIPCP11150 499 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 GABRB1P18505 474 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 CXCR1P25024 350 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 CASP3P42574 277 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 HTR3AP46098 478 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 SLC9A3P48764 834 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
TRAF4-210ENST00000475329 SNRPGP62308 76 aaKnown RBP12.5□□□□□ -0.41
TRAF4-210ENST00000475329 TOMM34Q15785 309 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-210ENST00000475329 PGGHGQ32M88 737 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 SLC30A6Q6NXT4 461 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 ZNF773Q6PK81 442 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 GRINAQ7Z429 371 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 CCDC103Q8IW40 242 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 SLC43A2Q8N370 569 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 TRUB1Q8WWH5 349 aaKnown RBP12.5□□□□□ -0.41
TRAF4-210ENST00000475329 ST8SIA1Q92185 356 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms