RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SCN2BO60939 215 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 NDUFS3O75489 264 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 VAMP5O95183 116 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 IGHEP01854 428 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 CLEC3BP05452 202 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 NCF1P14598 390 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 PPP3CBP16298 524 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF7P17097 686 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 MRC1P22897 1456 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 CD82P27701 267 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 C21orf33P30042 268 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 PTPN7P35236 360 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 KCNJ1P48048 391 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 PPT1P50897 306 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 RPS20P60866 119 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 CDC42P60953 191 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 DLK1P80370 383 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SIM1P81133 766 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 RPL19P84098 196 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 OGDHQ02218 1023 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 NPRL3Q12980 569 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 RTP5Q14D33 572 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 FCN2Q15485 313 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SURF1Q15526 300 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SURF2Q15527 256 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 PSG3Q16557 428 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 BSXQ3C1V8 233 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 GLYR1Q49A26 553 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 NCMAPQ5T1S8 102 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 FAM45BPQ6NSW5 357 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC23A3Q6PIS1 610 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 USP17L6PQ6QN14 398 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 TMEM108Q6UXF1 575 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 MOB2Q70IA6 237 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 UNC93AQ86WB7 457 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SERPINA12Q8IW75 414 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 C12orf76Q8N812 135 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 KCTD6Q8NC69 237 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 FBXO36Q8NEA4 188 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 OR5M9Q8NGP3 310 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 FAM45AQ8TCE6 357 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SPPL2BQ8TCT7 592 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 NPRL2Q8WTW4 380 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 CANT1Q8WVQ1 401 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 PCNPQ8WW12 178 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 C1orf54Q8WWF1 131 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 PHYHIPQ92561 330 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 EID2BQ96D98 161 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 FBXO17Q96EF6 278 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 OTUB1Q96FW1 271 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ACOX2Q99424 681 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 MTERF1Q99551 399 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 VPS25Q9BRG1 176 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 C7orf50Q9BRJ6 194 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ATG101Q9BSB4 218 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SUCNR1Q9BXA5 334 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 TUBA4BQ9H853 241 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ABCB9Q9NP78 766 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ACOT13Q9NPJ3 140 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC17A6Q9P2U8 582 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF222Q9UK12 451 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 UTS2RQ9UKP6 389 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 INSL6Q9Y581 213 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 KLK4Q9Y5K2 254 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 NPTNQ9Y639 398 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 V9GYS6 101 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SIPA1L1O43166 1804 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 SPEF2Q9C093 1822 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 ANKRD36CQ5JPF3 1778 aa5.54□□□□□ -1.52
ECHDC1-215ENST00000475319 TRBV11-1A0A0K0K1C0 115 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 C20orf202A1L168 122 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MBD3L4A6NDZ8 208 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MBD3L3A6NE82 208 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF587BE7ETH6 402 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ANHXE9PGG2 379 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 F5H6K3 240 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TLR4O00206 839 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF195O14628 629 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 NRP1O14786 923 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 LYRM1O43325 122 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TCF21O43680 179 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SRPX2O60687 465 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZMPSTE24O75844 475 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR2J2O76002 312 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 AP2A2O94973 939 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SGPL1O95470 568 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 CLDN9O95484 217 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ALDOCP09972 364 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 C1GALT1C1LP0DN25 315 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 FOSL2P15408 326 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 NQO2P16083 231 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ABOP16442 354 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 IL7RP16871 459 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 KDELR1P24390 212 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 KLRC2P26717 231 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 HTR2AP28223 471 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 AKT1P31749 480 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ACLYP53396 1101 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 RAG2P55895 527 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms