RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CNRIP1Q96F85 164 aaPredicted RBP12.06□□□□□ -0.48
CCNL1-216ENST00000475298 WDR89Q96FK6 387 aaPredicted RBP12.06□□□□□ -0.48
CCNL1-216ENST00000475298 ARHGAP9Q9BRR9 750 aa12.06□□□□□ -0.48
CCNL1-216ENST00000475298 MRPS30Q9NP92 439 aaKnown RBP12.06□□□□□ -0.48
CCNL1-216ENST00000475298 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.06□□□□□ -0.48
CCNL1-216ENST00000475298 FRS3O43559 492 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 EIF3GO75821 320 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 SOX30O94993 753 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 HPP00738 406 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 HMGN2P05204 90 aaKnown RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 PEPDP12955 493 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 NFYAP23511 347 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 BUD31P41223 144 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 IDNKQ5T6J7 187 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 VASNQ6EMK4 673 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 CMIPQ8IY22 773 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 FAM26EQ8N5C1 309 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 MS4A6EQ96DS6 147 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 ZNF582Q96NG8 517 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 FCRL4Q96PJ5 515 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 FUZQ9BT04 418 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 RPP25Q9BUL9 199 aaKnown RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 SPRTNQ9H040 489 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 TBC1D17Q9HA65 648 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 EQTNQ9NQ60 294 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 PHPT1Q9NRX4 125 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 MAN2C1Q9NTJ4 1040 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 TVP23BQ9NYZ1 205 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 ADAM29Q9UKF5 820 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 ACAD8Q9UKU7 415 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 CLCA2Q9UQC9 943 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 CD8B2A6NJW9 211 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 SUSD5O60279 629 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 AIFM1O95831 613 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 CD3GP09693 182 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 LIMS3P0CW19 117 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 LIMS4P0CW20 117 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 CD8BP10966 210 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 MMP11P24347 488 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 RBMS1P29558 406 aaKnown RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 E2F1Q01094 437 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 SLC9A5Q14940 896 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 ZSWIM7Q19AV6 140 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 RAB11FIP2Q7L804 512 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 IQCHQ86VS3 1027 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 PDZD9Q8IXQ8 264 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 RAB42Q8N4Z0 105 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 ACOT4Q8N9L9 421 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 OR14C36Q8NHC7 312 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 ACOT12Q8WYK0 555 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 LCORQ96JN0 433 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 C10orf90Q96M02 699 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 BTBD1Q9H0C5 482 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 SFXN1Q9H9B4 322 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 PRDM7Q9NQW5 492 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 NPDC1Q9NQX5 325 aaPredicted RBP12.05□□□□□ -0.48
CCNL1-216ENST00000475298 CBLCQ9ULV8 474 aa12.05□□□□□ -0.48
CCNL1-216ENST00000475298 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 RFXAPO00287 272 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 EIF1BO60739 113 aaKnown RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 GALR3O60755 368 aaPredicted RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 GABRA1P14867 456 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 RAB3BP20337 219 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 DRD5P21918 477 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 HIST1H1TP22492 207 aaPredicted RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 MST1P26927 711 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 NTSP30990 170 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 THBS2P35442 1172 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 IGFALSP35858 605 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 EIF1P41567 113 aaKnown RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 ZIC1Q15915 447 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR4K5Q8NGD3 323 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR2L8Q8NGY9 312 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR52N1Q8NH53 320 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR56B4Q8NH76 319 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 RPLP0P6Q8NHW5 317 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 TEX47Q8TBZ9 253 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 SFT2D1Q8WV19 159 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 ZG16BQ96DA0 208 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 FNDC11Q9BVV2 318 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 CA10Q9NS85 328 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 EMC3Q9P0I2 261 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 RPS6KB2Q9UBS0 482 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 CA5BQ9Y2D0 317 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 F5P12259 2224 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 SLC31A1O15431 190 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 ATG12O94817 140 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 EML2O95834 649 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 RLN2P04090 185 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 PPP2R1BP30154 601 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 SGCGQ13326 291 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 MLC1Q15049 377 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 HACD4Q5VWC8 232 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 ACSM5Q6NUN0 579 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 ABHD17CQ6PCB6 329 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 TOMM5Q8N4H5 51 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR2L3Q8NG85 312 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR1M1Q8NGA1 313 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 OR5M9Q8NGP3 310 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms