RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 IDH2P48735 452 aaKnown RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 ART1P52961 327 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 DSTNP60981 165 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 PLAURQ03405 335 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 POU4F3Q15319 338 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 GTDC1Q4AE62 458 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 SYT14P1Q58G82 188 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 ANKRD34AQ69YU3 496 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 SLC2A7Q6PXP3 512 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 BLOC1S3Q6QNY0 202 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 STAC2Q6ZMT1 411 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 TMPPEQ6ZT21 453 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 GRINAQ7Z429 371 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 ADGRG3Q86Y34 549 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 FUNDC1Q8IVP5 155 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 TUSC5Q8IXB3 177 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 PEX5LQ8IYB4 626 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 SLC25A43Q8WUT9 341 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 SLC38A5Q8WUX1 472 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 WDR60Q8WVS4 1066 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 AURKBQ96GD4 344 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 MAGEB18Q96M61 343 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 TACO1Q9BSH4 297 aaKnown RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 PAIP1Q9H074 479 aaKnown RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 C12orf49Q9H741 205 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 CTPS2Q9NRF8 586 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 CCM2LQ9NUG4 571 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 TMEM45AQ9NWC5 275 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 KLHL13Q9P2N7 655 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 P2RX2Q9UBL9 471 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 CHRNA9Q9UGM1 479 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 PCDHB14Q9Y5E9 798 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 SPIN1Q9Y657 262 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 MAP1AP78559 2803 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 SPG11Q96JI7 2443 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 A0A096LPI6 279 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 IGHV3-15A0A0B4J1V0 119 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 A0A0G2JPF8 293 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CFAP73A6NFT4 308 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 HNRNPCL2B2RXH8 293 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 HNRNPCL3B7ZW38 293 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 SULT2B1O00204 365 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CLIC1O00299 241 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 FAAHO00519 579 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 AP3D1O14617 1153 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 SMAD9O15198 467 aaKnown RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 HNRNPCL1O60812 293 aaKnown RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 HNRNPCL4P0DMR1 293 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 TFPIP10646 304 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 PPP3CBP16298 524 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CRYGSP22914 178 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CCKARP32238 428 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 HTR3AP46098 478 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CLK1P49759 484 aaKnown RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 DIO1P49895 249 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CRISP3P54108 245 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CSNK2A1P68400 391 aaPredicted RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 IRX1P78414 480 aaPredicted RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 RGNQ15493 299 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 C22orf34Q6ZV56 151 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF550Q7Z398 422 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 NUFIP2Q7Z417 695 aaKnown RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 OR52P1PQ8NH57 321 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 FOXC2Q99958 501 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 RAD21L1Q9H4I0 556 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 SLC52A3Q9NQ40 469 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 CCDC167Q9P0B6 97 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 C6orf203Q9P0P8 240 aaPredicted RBP9.96□□□□□ -0.82
CKS1B-206ENST00000474215 KLHL9Q9P2J3 617 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF232Q9UNY5 417 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 PLEKHA6Q9Y2H5 1048 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 GPR52Q9Y2T5 361 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 DSPPQ9NZW4 1301 aa9.96□□□□□ -0.82
CKS1B-206ENST00000474215 HIVEP1P15822 2718 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 CDHR4A6H8M9 788 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 TMEM247A6NEH6 219 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 DEFB108AA8MXU0 73 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 CYTIPO60759 359 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 SASH3O75995 380 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 RAF1P04049 648 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 BCHEP06276 602 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 UQCRBP14927 111 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 HOXB9P17482 250 aaPredicted RBP9.95□□□□□ -0.82
CKS1B-206ENST00000474215 CCNA2P20248 432 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 SLC1A3P43003 542 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 ATP4BP51164 291 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 MAP2K6P52564 334 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 RASGEF1BQ0VAM2 473 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 EPS8Q12929 822 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 LARS2Q15031 903 aaKnown RBP9.95□□□□□ -0.82
CKS1B-206ENST00000474215 ZSWIM7Q19AV6 140 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 AGKQ53H12 422 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 LRIF1Q5T3J3 769 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 MRPL2Q5T653 305 aaKnown RBP9.95□□□□□ -0.82
CKS1B-206ENST00000474215 PAMR1Q6UXH9 720 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 MTDHQ86UE4 582 aaKnown RBP9.95□□□□□ -0.82
CKS1B-206ENST00000474215 VRK2Q86Y07 508 aa9.95□□□□□ -0.82
CKS1B-206ENST00000474215 STON2Q8WXE9 905 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms